PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452166.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 750aa MW: 83733.8 Da PI: 5.3292

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.9	1.1e-24	225	326	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+ltpsd++++g +++ +++a+e+ ++++++ ++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD+++F + ++ XP_026452166.1 225 FCKILTPSDTSTHGGFSVLRRHANEClppldmSQQPPC-QELVAKDLHGVEWRFRHIYRGQPKRHLLTSGWSTFVNSKKLVAGDTFIFI--RAED 316 99***************************7555556.5*********************************************..4599 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+v+++r+ XP_026452166.1 317 GELRVGFRRA 326 99**9985 PP
2	Auxin_resp	96.4	4.4e-32	352	433	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 a+ha+st+s+F+v+Y+Pr+s+se +++++++++++++++vG+Rfkm++++e+++e r sGt vg+++ dpv+Wp S+W++L XP_026452166.1 352 ASHALSTGSMFSVYYRPRTSPSELLIPYKQYMNSVRSSFAVGTRFKMRIDSEEAPEERPSGTLVGIEEDDPVHWPCSQWKCL 433 789******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MSNRMDIGKR YGDGSDGFLK VVVSEMIYDR VVSNYFAGSL DWSDLFASKR AENWEEVPQG 60 CHVTNVVNEK RVIPAGADHF QEDIKRCEEL VVGLFVGGKL PFMMIQSLLC LLPEMKDGIY 120 GALWNACAGP SVKIPHIGEK VFYFPQGHLE QVKVYTNQQT SSQMPVYDLP SKILCRVIYV 180 QLKAEMESDE VFAQVTLVPD SKQDEPGINK EKLLFPSKNT KVYSFCKILT PSDTSTHGGF 240 SVLRRHANEC LPPLDMSQQP PCQELVAKDL HGVEWRFRHI YRGQPKRHLL TSGWSTFVNS 300 KKLVAGDTFI FIRAEDGELR VGFRRALSKI QSYPSTSVLS SHTMQLGILA TASHALSTGS 360 MFSVYYRPRT SPSELLIPYK QYMNSVRSSF AVGTRFKMRI DSEEAPEERP SGTLVGIEED 420 DPVHWPCSQW KCLVAHWDEP SSSVPRPLRI SPWMIEPLSA ATNMQQVQPR TKRLRTSQAS 480 PDESSTLSND VPSLGLSLGS TEYAPPLPGQ SSGVFHGQEN GQIPSNTNLI PPRNYNWGQN 540 PFPFQRNDPF YMDPGNNLPI NGAYQDVSRF DSNFHPPLFS TCNDSRNSGF SENRSVPQFS 600 FPSSGFPGMM GHGHDEVPMH QQTDSSPCML FGVDLVKIPM GTTPASEMSF PQFFHDNCHV 660 PHFSMVDSDQ ISDPSKITNP SYSSGSGSGV EKPCQSCSNT PTKFYKEEGY EGNNGSDKKN 720 EEDEGNDAGD KHDENEEVND AGDKEEEENE

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MSNRMDIGKR YGDGSDGFLK VVVSEMIYDR VVSNYFAGSL DWSDLFASKR AENWEEVPQG  60
CHVTNVVNEK RVIPAGADHF QEDIKRCEEL VVGLFVGGKL PFMMIQSLLC LLPEMKDGIY  120
GALWNACAGP SVKIPHIGEK VFYFPQGHLE QVKVYTNQQT SSQMPVYDLP SKILCRVIYV  180
QLKAEMESDE VFAQVTLVPD SKQDEPGINK EKLLFPSKNT KVYSFCKILT PSDTSTHGGF  240
SVLRRHANEC LPPLDMSQQP PCQELVAKDL HGVEWRFRHI YRGQPKRHLL TSGWSTFVNS  300
KKLVAGDTFI FIRAEDGELR VGFRRALSKI QSYPSTSVLS SHTMQLGILA TASHALSTGS  360
MFSVYYRPRT SPSELLIPYK QYMNSVRSSF AVGTRFKMRI DSEEAPEERP SGTLVGIEED  420
DPVHWPCSQW KCLVAHWDEP SSSVPRPLRI SPWMIEPLSA ATNMQQVQPR TKRLRTSQAS  480
PDESSTLSND VPSLGLSLGS TEYAPPLPGQ SSGVFHGQEN GQIPSNTNLI PPRNYNWGQN  540
PFPFQRNDPF YMDPGNNLPI NGAYQDVSRF DSNFHPPLFS TCNDSRNSGF SENRSVPQFS  600
FPSSGFPGMM GHGHDEVPMH QQTDSSPCML FGVDLVKIPM GTTPASEMSF PQFFHDNCHV  660
PHFSMVDSDQ ISDPSKITNP SYSSGSGSGV EKPCQSCSNT PTKFYKEEGY EGNNGSDKKN  720
EEDEGNDAGD KHDENEEVND AGDKEEEENE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	1e-166	ARF family protein