PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026451298.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 427aa    MW: 46703.9 Da    PI: 8.2966
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026451298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.45.6e-09100119525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                     +C++++  G C+yG+rCkF H
  XP_026451298.1 100 ICKYWMS-GKCSYGERCKFLH 119
                     7******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MGIDNRRSGG GVPTIDEVCR HWRAGRCTRN PCQYRHSELP QPCSNNGRQQ PSDQRNFSLS  60
GSFPQRKPNT YNRVPSKWGS QGGAVNGRPK GTGFKAQDQI CKYWMSGKCS YGERCKFLHR  120
WFASDDFTML AQLAGHEKVI SGIALPKGSD KLYSGGKDGT VRVWDCQTGK CATVINLGSE  180
VGCVISEDPW VFVGINNCVK AWNTQTNSEL SLCGPSGQVY ALAVGNEKLF AATQDGTILV  240
WKFAAATNGF EPAAALQGHS ASVVTLVVGA NILYSGSMDN TIRVWGLETL QCIYTLRDHT  300
SVVMSVLCWD QFLLSCSLDK TIKVWAVTKT GKLEVTYTHE EEHGLLALSG MPDAQGKPVL  360
ICSCNDNTVR LYDLPSFKER GKIYAKEETR AIQTAPGGLF FTGDGNGDLK VWKWTEQSPA  420
AAATMQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.11e-178C3H family protein