PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026450886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | TCP | ||||||||
Protein Properties | Length: 377aa MW: 41659 Da PI: 7.5668 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 99 | 8.8e-31 | 46 | 185 | 2 | 133 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg. 88 g+kdrhsk+ T +g RdRRvRls+++a++f+dLqd+LG+ ++sk+ eWL+++a a +l+++ + +++ e + XP_026450886.1 46 SGGKDRHSKVLTTKGVRDRRVRLSVSTAIQFYDLQDRLGYVQPSKAFEWLIKAAANASTQLPSLnaafldaPKQPSDEKRI------------Hr 128 689*************************************************************66555442222211111............11 PP TCP 89 ..............kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 ++ sa ++k++++ +as l+ ++ ra+arert++++ ++ XP_026450886.1 129 tvnmeptlymdeveIEMDSAYNPKQQHNLSASLLACTS--TSEIRAKARERTANDKEKE 185 12233456666773444445488888888885555555..4555555555555554443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MKIGRKGSAD QHQQKQDAED EEAAFGNPIT NRAWQSSRIF KVSKASGGKD RHSKVLTTKG 60 VRDRRVRLSV STAIQFYDLQ DRLGYVQPSK AFEWLIKAAA NASTQLPSLN AAFLDAPKQP 120 SDEKRIHRTV NMEPTLYMDE VEIEMDSAYN PKQQHNLSAS LLACTSTSEI RAKARERTAN 180 DKEKEKPDEA PHYQHTSSFT ELLTGAQQNN RTHRPLAPTQ IDDYFSVGDF GGATLRNNNI 240 YSSSGFSTQT DYGSSPQAIP CIMEVPTSPL SPFTVTADHH NSHHHHQNQQ HPEMRQFSSL 300 PEHLIPDTAA ATANAGSNRV ASDLSHSPLF HHFKQRFSSS PSDGPNIPFF MGNVGNAASC 360 SITPEGNQFL SGFRGGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30210.2 | 1e-40 | TCP family protein |