PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026450883.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 619aa MW: 68664 Da PI: 6.7976

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026450883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.2e-15	291	350	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aaka++ a++k++g XP_026450883.1 291 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEDKAAKAYDLAALKYWG 350 78*****************655454478446******99***********98 PP
2	AP2	45.8	1.5e-14	395	444	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026450883.1 395 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 444 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MSNCNWLGFS LSSIEDGFGG GGGDNASFSS HNHHDHISVM PLRFDGSLCI VDDPFVRHSA 60 NSSGWTYENH TMSTTSTTTE GDEAGGPKLE DLLGSYSNST DHQTNDVYNY HHQQQHDQNQ 120 QTYGDNGCRI NMNIPPPTST FMKGDIDDNI TNPYLNYNFQ QHYNINSNSN TTTIYHHHHP 180 QVPLENATSI SGFKNWLRQG APFPNDKSLV IVDPINTHNP MHQNSSLSLS MNPVSSSEAN 240 NPNGNALCVQ QQQQQQQSAS TRKRSTIGKN GGVVREPVPR KSLDTFGQRT SQYRGVTRHR 300 WTGRYEAHLW DNSCRKEGQT RKGRQVYLGG YDKEDKAAKA YDLAALKYWG PTTHINFPLS 360 VYEKELEEMK HMNRQEFVAS LRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVAGNKDL 420 YLGTFSTQEE AAEAYDIAAI KFRGVSAVTN FDISKYDVKR ICASSTLIGG DLAKRPSPQN 480 SSSSVAAIEN EPVVVPNLAI ANAEQPSDEF ATIMWSNSSS EEQNQIPNEP NTSVRSMSMS 540 NQNSSNQGSP KSSSVVSQSD QYDHTMGGGD YSSQFTMNSA AESGPTSVDQ VSANWTTAGR 600 ESPNISVHHQ LPMFALWNE

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MSNCNWLGFS LSSIEDGFGG GGGDNASFSS HNHHDHISVM PLRFDGSLCI VDDPFVRHSA  60
NSSGWTYENH TMSTTSTTTE GDEAGGPKLE DLLGSYSNST DHQTNDVYNY HHQQQHDQNQ  120
QTYGDNGCRI NMNIPPPTST FMKGDIDDNI TNPYLNYNFQ QHYNINSNSN TTTIYHHHHP  180
QVPLENATSI SGFKNWLRQG APFPNDKSLV IVDPINTHNP MHQNSSLSLS MNPVSSSEAN  240
NPNGNALCVQ QQQQQQQSAS TRKRSTIGKN GGVVREPVPR KSLDTFGQRT SQYRGVTRHR  300
WTGRYEAHLW DNSCRKEGQT RKGRQVYLGG YDKEDKAAKA YDLAALKYWG PTTHINFPLS  360
VYEKELEEMK HMNRQEFVAS LRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVAGNKDL  420
YLGTFSTQEE AAEAYDIAAI KFRGVSAVTN FDISKYDVKR ICASSTLIGG DLAKRPSPQN  480
SSSSVAAIEN EPVVVPNLAI ANAEQPSDEF ATIMWSNSSS EEQNQIPNEP NTSVRSMSMS  540
NQNSSNQGSP KSSSVVSQSD QYDHTMGGGD YSSQFTMNSA AESGPTSVDQ VSANWTTAGR  600
ESPNISVHHQ LPMFALWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-110	AP2 family protein