PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026450523.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 375aa    MW: 39952.7 Da    PI: 6.5042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026450523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.5e-13135178855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP++      K +K++i+ +Av+YIk Lq
  XP_026450523.1 135 TERERRKKMRNMFSNLHALLPQL----PAKADKSTIVDEAVNYIKTLQ 178
                     6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MGTSDEIGGG GGGGPGNFLF ENQTWASVFS SINSDNSGGV CSTEELHKTT TSITSKKLID  60
STSTSPTLTP TPTPTPTPTA VTPPELVVGQ TTSTSHQKRS RGGAKSSTGK GTSGGGDWNE  120
CKLGGESDHE IHIWTERERR KKMRNMFSNL HALLPQLPAK ADKSTIVDEA VNYIKTLQHS  180
LQKLQKQRLE MLRGGGGGGP TLTTPTVIDY EPSSSSLVVA SNSPTLNTRE AFLADQAGPS  240
SASMNNNSSS SMINDNMTFS SAAPNNSLSV VPCINNIPST FQTWSSPNVV LSVNGDDAQI  300
SVCAPRKPGL LTTCCYVLEK HKLEVVTAHV SSDCYRSMFM IHAHANGACD QFPEPLPVEE  360
IYKLAVGEMI FWLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-49bHLH family protein