PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026450392.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 483aa MW: 53163.2 Da PI: 9.8583

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026450392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	9.9e-33	197	252	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh XP_026450392.1 197 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHA 252 9*************************************.*************7 PP
2	WRKY	105.3	3.2e-33	400	457	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg++fprsYYrC+s +C+v+k+vers +dp+++++tYeg+Hnh+ XP_026450392.1 400 GDGFRWRKYGQKVVKGNPFPRSYYRCSSLKCNVRKHVERSLDDPTAFITTYEGKHNHD 457 59*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MEDKATENNN KMVLAKPKAS RPSCSKFQSF SALLTGAIST SSSSPNSICE TAVAPIRPKT 60 LRIKPAESLA SNAAVSSQGE ASGSAAYSLK AEIKSSVVYK PLAKLVSRKT ASQLANMGNS 120 SMSSQQATVQ VQAYAQNTSR TKHHFQTPVT TDIRQELPWP PVSINQINDP SKMALRKPKE 180 NPKDLMPTVS GDRPSYDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSFDGQI 240 AEIVYKGEHN HAKPQPPKRH TLGTLDQGLA SDGAGHETSS NSLWSNSLDE RNQGSENRLE 300 NRSAIGFSYN PFSYTSKAPM PYDSVTSGGA FNSSGLGTPE SSYGLSGDCD EASRRINAAD 360 DDTKYKRRKK ENQSSDVLMS QGVQEPRVVL QGTTDAEIIG DGFRWRKYGQ KVVKGNPFPR 420 SYYRCSSLKC NVRKHVERSL DDPTAFITTY EGKHNHDMPS SRNINPSASH DIDSNPAIYK 480 PNQ

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MEDKATENNN KMVLAKPKAS RPSCSKFQSF SALLTGAIST SSSSPNSICE TAVAPIRPKT  60
LRIKPAESLA SNAAVSSQGE ASGSAAYSLK AEIKSSVVYK PLAKLVSRKT ASQLANMGNS  120
SMSSQQATVQ VQAYAQNTSR TKHHFQTPVT TDIRQELPWP PVSINQINDP SKMALRKPKE  180
NPKDLMPTVS GDRPSYDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSFDGQI  240
AEIVYKGEHN HAKPQPPKRH TLGTLDQGLA SDGAGHETSS NSLWSNSLDE RNQGSENRLE  300
NRSAIGFSYN PFSYTSKAPM PYDSVTSGGA FNSSGLGTPE SSYGLSGDCD EASRRINAAD  360
DDTKYKRRKK ENQSSDVLMS QGVQEPRVVL QGTTDAEIIG DGFRWRKYGQ KVVKGNPFPR  420
SYYRCSSLKC NVRKHVERSL DDPTAFITTY EGKHNHDMPS SRNINPSASH DIDSNPAIYK  480
PNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	2e-88	WRKY family protein