PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449907.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 355aa MW: 40687.5 Da PI: 5.0929

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	117.6	7.4e-37	43	135	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++++++++++sws++gn+fvv+d+++f+ ++Lp+ Fkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+k+ll++ XP_026449907.1 43 FLTKTYEMVDNPSTDHIVSWSRTGNTFVVWDPHTFSMELLPRCFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEEFLRGHKHLLKN 128 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k + XP_026449907.1 129 IRRRKAT 135 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDPVKKEFTG ISLISYADDG HQQSMIPAPQ PLEGLHDPGP PPFLTKTYEM VDNPSTDHIV 60 SWSRTGNTFV VWDPHTFSME LLPRCFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEEFLR 120 GHKHLLKNIR RRKATSVSPL QQQNLGACVE VGRFGLDGEI NRLRRDKQVL MGELVKLRQQ 180 QQNTKEYLQA MEQRLQGTEA KQQQMMNFLA RAMQNPAFIQ QLVDQKDKRK ELQEAITKKR 240 RRQIDQGTSN LGIGVSIHSY GEDAIKTEQH NFGFAVSELE TLASEMQGYN QGGTEQGEAQ 300 REEEAAWKPD DVVLDNNFWE ELLNEKIGEE NFEGTEDEDV SVLADQLGYL GSSPQ

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDPVKKEFTG ISLISYADDG HQQSMIPAPQ PLEGLHDPGP PPFLTKTYEM VDNPSTDHIV  60
SWSRTGNTFV VWDPHTFSME LLPRCFKHNN FSSFVRQLNT YGFRKVDPDR WEFANEEFLR  120
GHKHLLKNIR RRKATSVSPL QQQNLGACVE VGRFGLDGEI NRLRRDKQVL MGELVKLRQQ  180
QQNTKEYLQA MEQRLQGTEA KQQQMMNFLA RAMQNPAFIQ QLVDQKDKRK ELQEAITKKR  240
RRQIDQGTSN LGIGVSIHSY GEDAIKTEQH NFGFAVSELE TLASEMQGYN QGGTEQGEAQ  300
REEEAAWKPD DVVLDNNFWE ELLNEKIGEE NFEGTEDEDV SVLADQLGYL GSSPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	242	KRKELQEAITKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-125	HSF family protein