PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449658.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 489aa MW: 54890.4 Da PI: 6.5766

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.7e-10	288	335	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026449658.1 288 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 335 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MNRVLTQEML HCMQASSTSG NHNNNYRFNN GTDLTVLERQ RARQNWQQQQ HQQQETEAPQ 60 TYLSNDAHFA NLFQLPLTTS NFDHHQGFMN DSMMREFVNR SMKTDPSLEN GWSTDFGKYP 120 VPKTGFGEEI ITTGFSSTSN GFVSNNNNSG NEMSNISISR TTSCPPIVGD TVLPATIVAA 180 AAEEKSKEIC SPGKMSSIVG RKRKADKAHN SKVNGVAEEL KDKRIKVDMA EEVESKITHE 240 QPQQHKNNNI NNKENSPDTS KDNNSKISEV QKPDYIHVRA RRGQATDSHS LAERVRREKI 300 SERMKYLQDL VPGCNKITGK AGMLDEIINY VQSLQRQVEF LSMKLATVKP RLDVNIDNFF 360 AKDMFPSSGV FSNMGMLNAD MVNSSTYLQS FNPTMQEMIS SCGLDMVINP PEMAAALRRT 420 ISAPPLPLSD AFLDTSCFTQ DQPTSTTWET DLQNIYSIVE FPQGRAHPSV FPHQSYTGSM 480 EGNNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MNRVLTQEML HCMQASSTSG NHNNNYRFNN GTDLTVLERQ RARQNWQQQQ HQQQETEAPQ  60
TYLSNDAHFA NLFQLPLTTS NFDHHQGFMN DSMMREFVNR SMKTDPSLEN GWSTDFGKYP  120
VPKTGFGEEI ITTGFSSTSN GFVSNNNNSG NEMSNISISR TTSCPPIVGD TVLPATIVAA  180
AAEEKSKEIC SPGKMSSIVG RKRKADKAHN SKVNGVAEEL KDKRIKVDMA EEVESKITHE  240
QPQQHKNNNI NNKENSPDTS KDNNSKISEV QKPDYIHVRA RRGQATDSHS LAERVRREKI  300
SERMKYLQDL VPGCNKITGK AGMLDEIINY VQSLQRQVEF LSMKLATVKP RLDVNIDNFF  360
AKDMFPSSGV FSNMGMLNAD MVNSSTYLQS FNPTMQEMIS SCGLDMVINP PEMAAALRRT  420
ISAPPLPLSD AFLDTSCFTQ DQPTSTTWET DLQNIYSIVE FPQGRAHPSV FPHQSYTGSM  480
EGNNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	1e-52	bHLH family protein