PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026449510.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 394aa    MW: 44258.4 Da    PI: 5.1797
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026449510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.81.1e-16239275135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_026449510.1 239 CSHCGTSEssTPAMRRGPAGPRTLCNACGLMWANKGT 275
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MVPVDRYSDD DDDLEDMMPP ENPLPLQARP FDDHMIPTDD DEEDDDHHHD HDRRRDDDED  60
DEDDYDGGGG GDETEDDLQD IPVNSGGNFR NASTRTRTSE LTLAFEGEVY VFPSITYEKV  120
QAVLLLLGGR DIPTAVPAVD VSYHQNDRAA SDAPRRSNLS KRIDSLVKFR EKRKERNFDK  180
KIRYNVPKEV SQKMHRKKGQ FASSKQAKQG RVNSSSRDSS QFLLQGDVTP RSEVGSRRCS  240
HCGTSESSTP AMRRGPAGPR TLCNACGLMW ANKGTLRDLS KGGKTPLSFQ NGQGTRKDTK  300
ALPTDTRDLS PDLDEEGTPE DVRRGASYGD MDEQGSPDDL KPSRKIRNSY ADSDQELFED  360
YTKPLAFHMK KSSAKCKEPS FYRPTNSSTR RKNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-68GATA family protein