PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448851.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 437aa    MW: 49957.1 Da    PI: 4.3275
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.83.3e-07241283855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er+RR+r+ + +  Lr l+P+      +K++K ++L  A  Y++++q
  XP_026448851.1 241 SERNRRKRLSQQLLALRALVPNI-----TKMDKRSVLVDALSYLRNMQ 283
                     6*********************7.....6****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MEGVDAYSFH EELNQESMNN SKSKILDTIS LWLDLDDPSI IPQELQQLQD LQMLDENFFE  60
FANTTTTGTN MEYEHPYPEC NILPALPRPD SPFLLDLHEF DNNIISQPED HYYHPVLPGH  120
EEVILDQPVN NEAECEQYLN VMTESSPDSI GVDQYFQTEN DNVITMASIS PSSSVSDVPQ  180
QPRLKMQKTQ NIEKPPKVST KRHQSTTTVT AATVADDDDE EEEEIDDEPK KGTLNCKNLV  240
SERNRRKRLS QQLLALRALV PNITKMDKRS VLVDALSYLR NMQEETAKLQ KELKEQQLLQ  300
QRQPRLMNND IIMEEEEEED EDDLDDDIRP RIKTHAGSAS KTKPQIIEID IEKMEEKRFI  360
VKITCQGANG IAGDTFRVME TTGFEITYAA VDQIKPQHVL STVFIRVKKQ DKMTEEKLKD  420
CIISSALRCG LSVLPAC