PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448280.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 475aa MW: 52887.9 Da PI: 5.5978

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00054	369	403	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ +++ L++l + +K + a++L +A+eYIk L XP_026448280.1 369 KLGDRITALQQLCSPF-----GKTDTASVLYEAIEYIKFL 403 5556666666665555.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MADEYQSSGG ICSGNWWNNM KIGLSSSSSP ACSTTLTDIG SYNNWPISTI TDDQTVDMKY 60 PKLNHQAASP SDTSVIAGTN DVLLDNNSNS QMMGFDLSSP LTTSDWSQPL LSRSSEDHQQ 120 KEWSPKNCSG SSGGEDSSSI HSSFKQQQIN QGFSLDPQYC YSSNKIDNSD SCTGGLPMSF 180 SMNSASYECS PSTSTLLHSL YEPENHTEQL QRSSYDEDNR MSYPSSTTYT NYQLNPNELS 240 PSHPNWSSKF PQFLKTAVSS RQQPSNTNIN NHLQFSNNSQ FWNASPTSIL TGDNPSRLLP 300 SPQTQFLTPT LNDHQKPNCN NSLGFKPSIE EVQDSSSIVK KSKSSEPTYK RPRMETPSQL 360 PTFKVRKEKL GDRITALQQL CSPFGKTDTA SVLYEAIEYI KFLHDQVTVL SNPYMKHGSA 420 PMQYQQNMDN SKDGERTRQD LRSRGLCLVP MSSTFSVTNE TSTDFWTPTF GGTYR

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MADEYQSSGG ICSGNWWNNM KIGLSSSSSP ACSTTLTDIG SYNNWPISTI TDDQTVDMKY  60
PKLNHQAASP SDTSVIAGTN DVLLDNNSNS QMMGFDLSSP LTTSDWSQPL LSRSSEDHQQ  120
KEWSPKNCSG SSGGEDSSSI HSSFKQQQIN QGFSLDPQYC YSSNKIDNSD SCTGGLPMSF  180
SMNSASYECS PSTSTLLHSL YEPENHTEQL QRSSYDEDNR MSYPSSTTYT NYQLNPNELS  240
PSHPNWSSKF PQFLKTAVSS RQQPSNTNIN NHLQFSNNSQ FWNASPTSIL TGDNPSRLLP  300
SPQTQFLTPT LNDHQKPNCN NSLGFKPSIE EVQDSSSIVK KSKSSEPTYK RPRMETPSQL  360
PTFKVRKEKL GDRITALQQL CSPFGKTDTA SVLYEAIEYI KFLHDQVTVL SNPYMKHGSA  420
PMQYQQNMDN SKDGERTRQD LRSRGLCLVP MSSTFSVTNE TSTDFWTPTF GGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	2e-54	bHLH family protein