PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448279.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 476aa MW: 52975 Da PI: 5.5978

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00054	370	404	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ +++ L++l + +K + a++L +A+eYIk L XP_026448279.1 370 KLGDRITALQQLCSPF-----GKTDTASVLYEAIEYIKFL 404 5556666666665555.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MADEYQSSGG ICSGNWWNNM KIGLSSSSSP ACSTTLTDIG SYNNWPISTI TDDQTVDMKY 60 PKLNHQAASP SDTSVIAGTN DVLLDNNSNS QMMGFDLSSP LTTSDWSQPL LSSRSSEDHQ 120 QKEWSPKNCS GSSGGEDSSS IHSSFKQQQI NQGFSLDPQY CYSSNKIDNS DSCTGGLPMS 180 FSMNSASYEC SPSTSTLLHS LYEPENHTEQ LQRSSYDEDN RMSYPSSTTY TNYQLNPNEL 240 SPSHPNWSSK FPQFLKTAVS SRQQPSNTNI NNHLQFSNNS QFWNASPTSI LTGDNPSRLL 300 PSPQTQFLTP TLNDHQKPNC NNSLGFKPSI EEVQDSSSIV KKSKSSEPTY KRPRMETPSQ 360 LPTFKVRKEK LGDRITALQQ LCSPFGKTDT ASVLYEAIEY IKFLHDQVTV LSNPYMKHGS 420 APMQYQQNMD NSKDGERTRQ DLRSRGLCLV PMSSTFSVTN ETSTDFWTPT FGGTYR

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MADEYQSSGG ICSGNWWNNM KIGLSSSSSP ACSTTLTDIG SYNNWPISTI TDDQTVDMKY  60
PKLNHQAASP SDTSVIAGTN DVLLDNNSNS QMMGFDLSSP LTTSDWSQPL LSSRSSEDHQ  120
QKEWSPKNCS GSSGGEDSSS IHSSFKQQQI NQGFSLDPQY CYSSNKIDNS DSCTGGLPMS  180
FSMNSASYEC SPSTSTLLHS LYEPENHTEQ LQRSSYDEDN RMSYPSSTTY TNYQLNPNEL  240
SPSHPNWSSK FPQFLKTAVS SRQQPSNTNI NNHLQFSNNS QFWNASPTSI LTGDNPSRLL  300
PSPQTQFLTP TLNDHQKPNC NNSLGFKPSI EEVQDSSSIV KKSKSSEPTY KRPRMETPSQ  360
LPTFKVRKEK LGDRITALQQ LCSPFGKTDT ASVLYEAIEY IKFLHDQVTV LSNPYMKHGS  420
APMQYQQNMD NSKDGERTRQ DLRSRGLCLV PMSSTFSVTN ETSTDFWTPT FGGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	2e-54	bHLH family protein