PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026448256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 25776.2 Da PI: 5.188 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.6 | 2.9e-10 | 74 | 121 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL +l + + +K++Ka+iL Av+ + +L XP_026448256.1 74 SKACREKMRRDRLNDRFVELGCILDPG---RPPKMDKAAILSDAVRMVTQL 121 6789****************9999887...89**************99988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MVSPENPDWL LDYPLIAADF QAPTDGFNWA SQHLNGSNPV SVEIDDCFGD SVAVEETSSR 60 KRVRSDSSTS ASSSKACREK MRRDRLNDRF VELGCILDPG RPPKMDKAAI LSDAVRMVTQ 120 LKSETQKLME SNESLQEKIK ELKVEKNELR DEKQRLKSEK ENLEQQLKAT SAPPAGFMPH 180 PSAIPAAFTM QAQAAGDKLM PFMGYPGVAM WQFMPPGAVD ISQDHLQRPP VA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-91 | bHLH family protein |