PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448065.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 551aa    MW: 61432.8 Da    PI: 4.8446
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4493e-1371815501373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++cA+avs++dl +a++l+  l++++s +g+p+qRl ay++e+L arl+++++++yk+l+++e +   s+e l+++++++e++P++kf++
  XP_026448065.1 181 LKEVLISCAKAVSDDDLPRANQLIGDLRNMVSVSGEPIQRLGAYMLEGLVARLSSTGHGIYKSLKCKEPA---SAELLSYMHILYEACPYFKFGY 272
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI eav+ e+++HiiDf+i qG QW++L+qaLasRp+gpp++RiTg+++++s   +   l+ +g+rL+++A+++++pfef++ +  +  d
  XP_026448065.1 273 MSANGAIAEAVKDENHIHIIDFQIAQGSQWITLMQALASRPGGPPHIRITGIDDSNSAyaRGGGLQIVGQRLSRLADSCKIPFEFHA-APVSGVD 366
                     ******************************************************988899999************************.8889999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+++L+v+pgEa+aVn+ + lh+++desvs+e++rd++++l+kslsPkvv++veqe+++n++ Fl rfle+l+yy+a+f+s++a+l+r+++eri
  XP_026448065.1 367 IEFSSLEVRPGEAIAVNFPYVLHHMPDESVSTENHRDRLIRLIKSLSPKVVTLVEQESNTNTAAFLPRFLETLNYYTAMFESIDATLSRDHKERI 461
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r++vn++acegaer+erhe l+kW++r+++aGF+p+pls+ +++++k+ll  + ++ y++ e++g+l+lgW+dr Lv+ +aW
  XP_026448065.1 462 NVEQHCLARDVVNIIACEGAERVERHEVLGKWKSRFRMAGFTPYPLSSVVNSTIKTLLDSYCEK-YKLYEDDGALYLGWMDRDLVVSCAW 550
                     *************************************************************955.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MGYSSLQAAS QKHGGFVGSQ NTYDQELQSN YFPQSMRTLD ERRFTDETSH EMHYPAQTSS  60
EQYCTLESSS ATGGYTVYNT PSTVSFSPNG SPMSQQESHT YPQEPNHSPY DANGSPLSLS  120
CITDNENDMW SKLKELETAM LGPDTDTMDS PDSAFQGGLN SDQSAFDWNE MMEIMNPKRD  180
LKEVLISCAK AVSDDDLPRA NQLIGDLRNM VSVSGEPIQR LGAYMLEGLV ARLSSTGHGI  240
YKSLKCKEPA SAELLSYMHI LYEACPYFKF GYMSANGAIA EAVKDENHIH IIDFQIAQGS  300
QWITLMQALA SRPGGPPHIR ITGIDDSNSA YARGGGLQIV GQRLSRLADS CKIPFEFHAA  360
PVSGVDIEFS SLEVRPGEAI AVNFPYVLHH MPDESVSTEN HRDRLIRLIK SLSPKVVTLV  420
EQESNTNTAA FLPRFLETLN YYTAMFESID ATLSRDHKER INVEQHCLAR DVVNIIACEG  480
AERVERHEVL GKWKSRFRMA GFTPYPLSSV VNSTIKTLLD SYCEKYKLYE DDGALYLGWM  540
DRDLVVSCAW I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein