PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026448022.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 678aa MW: 78915.7 Da PI: 7.2405

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026448022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.8	5.7e-26	27	128	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +YneYA+ vGFs+r++k+++s+ +g + ++f+Cskeg+r++++++ + +rr+ + r+gC akl vk+ +dgkw+v k+++ XP_026448022.1 27 YYNEYARAVGFSIRRAKNRRSNIDGALIFQRFCCSKEGHRRKRRDNddeepkkmkdgvlVKVRRRNVRSIRVGCSAKLDVKRVTDGKWVVRKFDE 121 8***************************************99999*******9888999999*********************** PP FAR1 84 eHnHela 90 eHnHe+a XP_026448022.1 122 EHNHECA 128 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MDAPNDGTFY KPFVGMEFDS LDESYFYYNE YARAVGFSIR RAKNRRSNID GALIFQRFCC 60 SKEGHRRKRR DNDDEEPKKM KDGVLVKVRR RNVRSIRVGC SAKLDVKRVT DGKWVVRKFD 120 EEHNHECANS GEKHMLRSQR RIQSIQVDMS MSDCKIKKPE KGDVRALLNY FREMQTESPS 180 FFYAIQGGKD DRMLNFFWAD TRSRMDYGYF GDVVYFRSNY GINKYGRAFS PILGINHHLQ 240 TVLFGCAILL NENEESLTWL LETFLKAMSG RRPVAIVIDG DAAMMKAIEQ VLPGTRQSLC 300 LGEILVDASN HFSHLENMRD AFITDLKKCI YDTQWCDEFE SSWVLLHEKY KLHENEWLDN 360 LYKKRHMWAP VYSRHVFHAN MMTIQCIESI NSYFDGFVNE PLPLYEFLKQ YDKALDHRRD 420 EEISEDFQSL ETRPVLKLDV PMEQQAADLY TRSVFKEFHK EFCESFSYIA EETARVGTNW 480 TYAVSRWGQN RSCLVSFSSC NNDIRVNCDC QNFEFTGILC KHIFKVFTVR NIMLVPDVYI 540 RKRWTKKAKV GVFLGEGCRK ALEDCQKSQA FRFNDLCQLT FNLCAKSAIS INAYQTAKST 600 MEMIIGELDK EAEEEVSITQ PNIDHVSNLH YPIDAVNGIG SSDHLMGEDN QTLTSGNHVT 660 MQNPQRVGDT RTGFWLRL

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MDAPNDGTFY KPFVGMEFDS LDESYFYYNE YARAVGFSIR RAKNRRSNID GALIFQRFCC  60
SKEGHRRKRR DNDDEEPKKM KDGVLVKVRR RNVRSIRVGC SAKLDVKRVT DGKWVVRKFD  120
EEHNHECANS GEKHMLRSQR RIQSIQVDMS MSDCKIKKPE KGDVRALLNY FREMQTESPS  180
FFYAIQGGKD DRMLNFFWAD TRSRMDYGYF GDVVYFRSNY GINKYGRAFS PILGINHHLQ  240
TVLFGCAILL NENEESLTWL LETFLKAMSG RRPVAIVIDG DAAMMKAIEQ VLPGTRQSLC  300
LGEILVDASN HFSHLENMRD AFITDLKKCI YDTQWCDEFE SSWVLLHEKY KLHENEWLDN  360
LYKKRHMWAP VYSRHVFHAN MMTIQCIESI NSYFDGFVNE PLPLYEFLKQ YDKALDHRRD  420
EEISEDFQSL ETRPVLKLDV PMEQQAADLY TRSVFKEFHK EFCESFSYIA EETARVGTNW  480
TYAVSRWGQN RSCLVSFSSC NNDIRVNCDC QNFEFTGILC KHIFKVFTVR NIMLVPDVYI  540
RKRWTKKAKV GVFLGEGCRK ALEDCQKSQA FRFNDLCQLT FNLCAKSAIS INAYQTAKST  600
MEMIIGELDK EAEEEVSITQ PNIDHVSNLH YPIDAVNGIG SSDHLMGEDN QTLTSGNHVT  660
MQNPQRVGDT RTGFWLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-140	FAR1 family protein