PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447549.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 386aa    MW: 42585.4 Da    PI: 7.9289
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.31.3e-08132152526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck+Gd+C +aHg
  XP_026447549.1 132 ACPDFRK-GNCKRGDTCEYAHG 152
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MMVHVPPWSL YDQDSVSGNN NNMMYQLPVT GVGSGCNNNN INNGGGDYSP LCMSEAVSAL  60
SRYLPSNDLD SDDSDLSSVV DAYSCDEFRM YEFKVRRCSR GRSHDWTECP YAHPGEKARR  120
RDPRKFHYSG TACPDFRKGN CKRGDTCEYA HGVFECWLHP ARYRTQPCKD GTSCRRRVCF  180
FAHTPEQLRI LPSQSQLSPR NESSPPSYDG SPLRVALDSY YVGASPTSTL NLSPPMSPNS  240
GSPPMSPSTG MGRSIIGSNS VNEMVLNLRN LQLNKVKSAP SSWVLGSSSF CSPRASSSLR  300
PGFSSLPTTP TRTPTRSGGV GGYLDFWDQC GSLEEEPAME RVESGRNLRS KIYEKLSKEN  360
SFGRERVDSV PGSSGPDVQW VSELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-100C3H family protein