PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447341.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 396aa    MW: 43956.3 Da    PI: 6.5812
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.4e-19224257134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_026447341.1 224 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 257
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MTPIYSNSTL SPFPTTVESS TITDHDHSDH GDLDQVIQQH HHHYHQHLLF SSTSPTSSSS  60
LTSFPTIFFN NPIQDHVGNF GRDHEDHQLE VMNKYVLHGG SSSNDHQPHQ FFPSHDDSSH  120
PTLESTTTST TMVDHQETNN YGSGLKLSIY EQEEEEVVDE EEEDNKDHDD NDYKHIEIGS  180
SVKWMSSKMR LMKKMMNKPN KFDQSSAYSP PSNKDNNNNT VRVCADCNTT KTPLWRSGPR  240
GPKSLCNACG IRQRKARRAM AAAAAAAAAT NDGKVVVVAT DRKETISSSA PKNNKIKNSS  300
TATVTTAIPA VTTTTESGCT NNSMMPYKKR CKIVGPSSNY DNNNNNNNSS RKKLCFEDFT  360
ISLMSNSSLD HQQVFPQDEK EAAILLMALS YGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.12e-20GATA family protein