PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026447273.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 578aa MW: 64562.9 Da PI: 8.1077

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026447273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026447273.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP
2	zf-C2H2	12.5	0.00044	171	193	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_026447273.1 171 WKCEKCSKKYAVQSDWKAHSKTC 193 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MKGLIFQQQE QQQQQQLLVE ENMSSNLTNT TTSAASGEGI LSSSLSPHNQ SSTTTLTSSQ 60 TPSVKRKRSL PGNPDPDSEV IALSPKTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRNNKEV INKKVYVCPE VNCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCEKCSKKY 180 AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAEETARTP TISIINPLQQ 240 QHQLQPQYFH AQQQQQQQHY NLIRPEMPTW LSCPQPIELS TSSPSMYSTR FEQDQYSQQQ 300 TPTHENHENQ NKNYQQQISS PSAAASSPHM SATALLQKAA QMGATISKPS SSSAATASLM 360 NNRVLQPHHS HMSSSNGNNN PASTTSVTTT ETGFGLGLSS HEEDIENGSS DNNNSNSFVP 420 DHGLASFDDD HNNSTKAAMT SGNFMDHHIS AQTHQQQLQD MMNSLSSASG GFDMSSSSFG 480 HHHHQQAFDS TRRSSNESRA SSTTTTKTPK QKDGMTRDFL GLRAFSHADI LNMNMSIGDG 540 NKNFDHHLQQ QQCTAAASPH HFDHHQQVQN QDTKPWQQ

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MKGLIFQQQE QQQQQQLLVE ENMSSNLTNT TTSAASGEGI LSSSLSPHNQ SSTTTLTSSQ  60
TPSVKRKRSL PGNPDPDSEV IALSPKTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW  120
KLKQRNNKEV INKKVYVCPE VNCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCEKCSKKY  180
AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD ALAEETARTP TISIINPLQQ  240
QHQLQPQYFH AQQQQQQQHY NLIRPEMPTW LSCPQPIELS TSSPSMYSTR FEQDQYSQQQ  300
TPTHENHENQ NKNYQQQISS PSAAASSPHM SATALLQKAA QMGATISKPS SSSAATASLM  360
NNRVLQPHHS HMSSSNGNNN PASTTSVTTT ETGFGLGLSS HEEDIENGSS DNNNSNSFVP  420
DHGLASFDDD HNNSTKAAMT SGNFMDHHIS AQTHQQQLQD MMNSLSSASG GFDMSSSSFG  480
HHHHQQAFDS TRRSSNESRA SSTTTTKTPK QKDGMTRDFL GLRAFSHADI LNMNMSIGDG  540
NKNFDHHLQQ QQCTAAASPH HFDHHQQVQN QDTKPWQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13810.1	6e-98	C2H2 family protein