PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026446852.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 333aa    MW: 37724.9 Da    PI: 6.3802
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026446852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.8e-11169212654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +i+  ++eY+k+L
  XP_026446852.1 169 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSIVGDTIEYMKEL 212
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MELNENGFLE ELLELRRETL QTFPTGINDT HQFTHDGSAS FSYFSEYPSS AISSIKGFPI  60
PTEEPGFSYG FNEGYYPFEE ELSTQSTVVD TSYLKHGTLP FPSTQDNGLV MGNVESQLFA  120
DDLRNILGEK QSKVEVFPPT EIPIKLNKNL CKERKSRVKK IEGQPSKNLM AERRRRKRLN  180
DRLSMLRSVV PKISKMDRTS IVGDTIEYMK ELLEKIKNLQ NETEVGSDQL SRMGIFKDLK  240
QNEIINSPKF HVERRRNDTR VEVCCAGKPG LLLSTVTAIE TLGLEIQQCV TSSFNEFSMQ  300
ASCSEVLEHR LLISTGEIKQ ILIRNAGYGG KCC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172179ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.14e-73bHLH family protein