PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446605.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 546aa MW: 62402.5 Da PI: 8.0882

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.1	5.4e-27	61	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA++vGFsvrk++ +k+k ++e++ r f+Cs+eg+re++ + + ++ra trtgC a+++++ + d+++ + ++ +eHnHel+ XP_026446605.1 61 EFYNAYARTVGFSVRKQSASKRKADKEVMGRIFCCSREGEREKHPRG--TPTKPRALTRTGCMARMQIRINGDETYSIVSFMTEHNHELS 148 6****************************************9998..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MEEQEKSYSI DLNETIDPGE SISEENYVQT ITEVSVVTGK PMENDENIIG RTFKSDDDAY 60 EFYNAYARTV GFSVRKQSAS KRKADKEVMG RIFCCSREGE REKHPRGTPT KPRALTRTGC 120 MARMQIRING DETYSIVSFM TEHNHELSSQ DKVHLLRSQR KIQPAQSTLI NNMVYAGFGA 180 TRIFSYMSEE AGGPQNLNFT QEDCNNLVQA KRIDYLKEGD AKVLLAYFKR KQKENKSFFY 240 TIQVGDDDRI MNCFWCDAKS RLDYSIFGDV VCFDTTFKTN GYDMPFAPIV GVNNHDVMEG 300 KEMKTIFTDH ASQMATTIKQ NAAKNLSNIF GTHKSFASDF RKCIYDYETE DEFLLGWDQL 360 LETYDLKDNK WLNNLFKLRE KWSQVYGREH FCAELSHLAL SVPKSGCVNE ELSIVTKQAL 420 LRVLEEIKSH STSQPSSMED VYERNLLERD DEDIQQVNIT VKDPIRKKKT RGESSKRHKS 480 GPEKGKKGKK LAKFTKLVSP LDTGVVDKSD PSKSDKEAAK LSWDGVTNNQ KLGHGKRIPI 540 PAKKKM

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MEEQEKSYSI DLNETIDPGE SISEENYVQT ITEVSVVTGK PMENDENIIG RTFKSDDDAY  60
EFYNAYARTV GFSVRKQSAS KRKADKEVMG RIFCCSREGE REKHPRGTPT KPRALTRTGC  120
MARMQIRING DETYSIVSFM TEHNHELSSQ DKVHLLRSQR KIQPAQSTLI NNMVYAGFGA  180
TRIFSYMSEE AGGPQNLNFT QEDCNNLVQA KRIDYLKEGD AKVLLAYFKR KQKENKSFFY  240
TIQVGDDDRI MNCFWCDAKS RLDYSIFGDV VCFDTTFKTN GYDMPFAPIV GVNNHDVMEG  300
KEMKTIFTDH ASQMATTIKQ NAAKNLSNIF GTHKSFASDF RKCIYDYETE DEFLLGWDQL  360
LETYDLKDNK WLNNLFKLRE KWSQVYGREH FCAELSHLAL SVPKSGCVNE ELSIVTKQAL  420
LRVLEEIKSH STSQPSSMED VYERNLLERD DEDIQQVNIT VKDPIRKKKT RGESSKRHKS  480
GPEKGKKGKK LAKFTKLVSP LDTGVVDKSD PSKSDKEAAK LSWDGVTNNQ KLGHGKRIPI  540
PAKKKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-72	FAR1 family protein