PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446541.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CPP

Protein Properties

Length: 775aa MW: 85307.2 Da PI: 6.7906

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.2	5.2e-16	479	517	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C dC+Nk XP_026446541.1 479 SCKRCNCKKSKCLKLYCECFAAGVYCVEPCSCLDCFNKP 517 689**********************************96 PP
2	TCR	52	1.4e-16	561	599	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++kkgCnCkks+ClkkYCeCf+ g+ Cs +C+Ce+CkN XP_026446541.1 561 RHKKGCNCKKSSCLKKYCECFQGGVGCSINCRCEGCKNA 599 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MDTPERNRIC TPKSKFEDSP VFNYLNSLSP IKSVRSANIS QTFNSLSFSS PPSVFTSPHV 60 SSQKESRFLR RNFFSDSAKS GLASENGNDG NTRVTDAETA EIFNCSADPP QNPDSRSGTK 120 EVHLPNESLE LAIELPRKLN YGCESPESNP VPRHRYGTDS VREITGTSSS LRQFVQPSLE 180 RCSCPKNGVE VQEISQLEQK NDEEEGSDWE NMISDAAGLL VLDPSNDAEA TKEQLNPNIS 240 SLNSQAPDLP QEGLPKPQSG CLENANLGTE EGTVQKNTNC TPQKLQSTSR TKKQVKFHNE 300 KVDDKAEKDC KQQRGTRRRC LLFEMGGGQK RRLEDDSKSG SSSSPSDGKV TSEDRQLVPF 360 KAGNNSSPCM VPGIGLHLNA LAVSGKDNRV VKQENLPSGK SLISMSSHIT SLHTVESELQ 420 PLNKTFSLSS LERDIVPAVS EDQVMQDAYQ ASVFGVSEEF ESGSPRKRRR RYENGGDESC 480 KRCNCKKSKC LKLYCECFAA GVYCVEPCSC LDCFNKPIHE DTVLATRKQI ESRNPLAFAP 540 KVISHVAEIG EETYKTPASA RHKKGCNCKK SSCLKKYCEC FQGGVGCSIN CRCEGCKNAF 600 GTKDGYVPSG EEIEPEGEES ESSEKNNMRK SLQISEVHND IEEQYPDHVT PITPFQICRM 660 SVQLEFSSSS GKPPRLSIFP VGSSPRLLSN HIQQISGVLP TPLKLEKQFQ IAAPEDETPE 720 FLKGRNSSPI SGVKTASPNG KRVSPPHGKS TRKLVLQSIP SFPSLTFHDQ TDDHQ

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MDTPERNRIC TPKSKFEDSP VFNYLNSLSP IKSVRSANIS QTFNSLSFSS PPSVFTSPHV  60
SSQKESRFLR RNFFSDSAKS GLASENGNDG NTRVTDAETA EIFNCSADPP QNPDSRSGTK  120
EVHLPNESLE LAIELPRKLN YGCESPESNP VPRHRYGTDS VREITGTSSS LRQFVQPSLE  180
RCSCPKNGVE VQEISQLEQK NDEEEGSDWE NMISDAAGLL VLDPSNDAEA TKEQLNPNIS  240
SLNSQAPDLP QEGLPKPQSG CLENANLGTE EGTVQKNTNC TPQKLQSTSR TKKQVKFHNE  300
KVDDKAEKDC KQQRGTRRRC LLFEMGGGQK RRLEDDSKSG SSSSPSDGKV TSEDRQLVPF  360
KAGNNSSPCM VPGIGLHLNA LAVSGKDNRV VKQENLPSGK SLISMSSHIT SLHTVESELQ  420
PLNKTFSLSS LERDIVPAVS EDQVMQDAYQ ASVFGVSEEF ESGSPRKRRR RYENGGDESC  480
KRCNCKKSKC LKLYCECFAA GVYCVEPCSC LDCFNKPIHE DTVLATRKQI ESRNPLAFAP  540
KVISHVAEIG EETYKTPASA RHKKGCNCKK SSCLKKYCEC FQGGVGCSIN CRCEGCKNAF  600
GTKDGYVPSG EEIEPEGEES ESSEKNNMRK SLQISEVHND IEEQYPDHVT PITPFQICRM  660
SVQLEFSSSS GKPPRLSIFP VGSSPRLLSN HIQQISGVLP TPLKLEKQFQ IAAPEDETPE  720
FLKGRNSSPI SGVKTASPNG KRVSPPHGKS TRKLVLQSIP SFPSLTFHDQ TDDHQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	466	470	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-107	CPP family protein