PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026446446.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 438aa MW: 49063.2 Da PI: 7.9196 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.4 | 2.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_026446446.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44 | 5.2e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_026446446.1 67 RGTFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*******************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPNTHKPLS EVEVNGEEKA PTTTTINNGN NNTHGNKSPG GGFSTNDQMM MKFLKVDNSK 180 QLGLTVQEGS NSMNNIVTPT KDFFLDRPSS SSDTMVGYYP LHQLNYGSAS SPNNQNQSLW 240 FNQDTTRPFD SNSSISAVLP LAPTTSIHPT QLGLKPANSS VTTLDTLHQQ PDSFNLNGVH 300 SYWENGTSST NNSSISSGSS SIELHNNQSS NNHISSNNNN SFWFESEPEE IKWSEYLQNP 360 FLMASAASTQ TSTPPQQPQQ QQPIYNEIIK SETQFMNNDG LSTTSWHHQN PQQQFLQAAT 420 GDIYSKDFQR LAAALGQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 4e-91 | MYB family protein |