PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026446434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 184aa MW: 21613 Da PI: 10.7195 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.1 | 1.5e-11 | 88 | 124 | 11 | 48 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 llv++v+++G + W+ Ia+ +g +R +kqc++rw+++l XP_026446434.1 88 LLVRLVQEYGVKKWAFIASLIG-RRIGKQCRERWFNHL 124 89********************.*************97 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 130 | 172 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r++WT +E+ lv+a+ +G++ W+ Ia++++ gRt++++k++ + XP_026446434.1 130 RDAWTLDEEIALVEAHSAMGNR-WAEIAKRIP-GRTENSIKNHRN 172 789*******************.*********.**********65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MDGKRYLRYY MLGNVFVRET FKPHYLQSAA YSLQSGIRYF VYDSKMNQIW QGNKHCTKEA 60 SPEKEQGLAC TMAAAGLACG VRKQKCRLLV RLVQEYGVKK WAFIASLIGR RIGKQCRERW 120 FNHLRPDIKR DAWTLDEEIA LVEAHSAMGN RWAEIAKRIP GRTENSIKNH RNTTWRRQMN 180 KRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 7e-41 | MYB family protein |