PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446425.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1264aa MW: 144196 Da PI: 7.2076

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.8	3e-07	400	464	25	88
FAR1 25 ngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 g+ fvC ++g + ++ + ++++r++r++++++C k++ + ++kw++ l HnHe XP_026446425.1 400 AGKGSFVLFVCDRSGVYRYTSCTpDTRKRQRRESKKCDCPFKVRGTCLPENKWRLRVLCGRHNHE 464 45556678******999998878889999999999999999999999*************8 PP
2	FAR1	23.3	2.1e-07	701	769	21	88
FAR1 21 kskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++k +g+ f C+++g + ++ + + ++r++r+++++gC k++ + ++kw++ l HnHe XP_026446425.1 701 ETKPEGKGSFVLFACNRSGVYRYTSCTpDARKRQRRETKKCGCPFKVRGTCLPENKWRLRVLCGRHNHE 769 334566677889******99999886788889999999999999999*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1264 aa Download sequence
MKLRTHQLEK ESSLSNSSEH GGGSTEVSQL CRSEDDGLLN NPQKASDIKE VGFPISQKGI 60 DLTQSFETDQ VFDSRDAMFE WCQEVAKKKN TRLIIRKSQK KPAGKGSFIV VVCERSGVYQ 120 SHSNKIDTLG TEPQKRGSKK CGCPFTLRGA CLLENKWKLR VNCGRHNHEV ESNPVSFNRW 180 KQVEEQLLLD LTAKGAPPQQ VLQALKEKHK NNDVNLRTIY NKRSKLKQKE VESKSVMQQD 240 AGPVNHPHKD SNVMEENTPA LSVRIDVAQC FQTNAGPVNH PQKQSILMEE DTLISKAGID 300 MTQCFQNDQG KGLKNSNMME GDAPISKEGV EDEIPVSDPP KDGNMMEADS SISKKGMDVT 360 QFFQTDQLFD SRDAAFEWCQ EVADKNKTRV IIGKSETKPA GKGSFVLFVC DRSGVYRYTS 420 CTPDTRKRQR RESKKCDCPF KVRGTCLPEN KWRLRVLCGR HNHEAENTSV PLFNRDEEQL 480 GVKLTASGDR PQQVLEALKE KNKECLASTS GSAIYNTRSK LKLKEVARKS VAQEDAGSVN 540 HPHKDSNVME ENTPASNERI NVARCFQTDA GPVSHLQKES ILMEEDTLIS KVGIDVTQCF 600 QTYQGEGPVK DPLNGSNMME EDVPTSKEGM EITHFYQTDQ NKISPEDVNM MEDDAPIWRE 660 GMDVTQFFQT DQLFDSRDAA FEWCQEVARE NNTRIIIRKS ETKPEGKGSF VLFACNRSGV 720 YRYTSCTPDA RKRQRRETKK CGCPFKVRGT CLPENKWRLR VLCGRHNHEA ENIPLPLFNR 780 DVDQLVVKLT ASGARPRQVV EALKQKNKDC LVSAKDIYNR RSSLKRHVAE KMSVMEQVMK 840 LSTQYHYMVW YRKDEETNEL KDIVWAHPES TLLAKCFPSM LMIDCTYKTN RFKVPFFHVA 900 GISSLGTPFT VAYAFIEEET KEHFSWALTQ LKSLFFPHSL PSVCVMNGDH PLINAVRSVF 960 PEAKRLLCTL HIGECVVTNC RKAISDDKEW DDFHRDWECV LKSETKEDFA DTYTEFVTTW 1020 VTRYPTCIKY IRDTWIVHKE SFILCWTRKI KHFGYKEVST DESEHEQLRK HMESSTSTTG 1080 FFRCWEAMHS IVKDQINQIS ASNEKSLTYI NRKHQIPAFG ELKNHVSQHA LDLILLELEQ 1140 LAVVESQKDI PQRALKLRQP ECNQSVDTST GIISCWCLIS YMHGLPCAHE VHNYIQDGRP 1200 IPLSAIDQQW KQLSVVLSLN DNLDFICLPE VQLLQERWME ASESDRSLLQ EQMKEVASSC 1260 DLAS

Sequence ? help Back to Top

Protein Sequence Length: 1264 aa Download sequence

MKLRTHQLEK ESSLSNSSEH GGGSTEVSQL CRSEDDGLLN NPQKASDIKE VGFPISQKGI  60
DLTQSFETDQ VFDSRDAMFE WCQEVAKKKN TRLIIRKSQK KPAGKGSFIV VVCERSGVYQ  120
SHSNKIDTLG TEPQKRGSKK CGCPFTLRGA CLLENKWKLR VNCGRHNHEV ESNPVSFNRW  180
KQVEEQLLLD LTAKGAPPQQ VLQALKEKHK NNDVNLRTIY NKRSKLKQKE VESKSVMQQD  240
AGPVNHPHKD SNVMEENTPA LSVRIDVAQC FQTNAGPVNH PQKQSILMEE DTLISKAGID  300
MTQCFQNDQG KGLKNSNMME GDAPISKEGV EDEIPVSDPP KDGNMMEADS SISKKGMDVT  360
QFFQTDQLFD SRDAAFEWCQ EVADKNKTRV IIGKSETKPA GKGSFVLFVC DRSGVYRYTS  420
CTPDTRKRQR RESKKCDCPF KVRGTCLPEN KWRLRVLCGR HNHEAENTSV PLFNRDEEQL  480
GVKLTASGDR PQQVLEALKE KNKECLASTS GSAIYNTRSK LKLKEVARKS VAQEDAGSVN  540
HPHKDSNVME ENTPASNERI NVARCFQTDA GPVSHLQKES ILMEEDTLIS KVGIDVTQCF  600
QTYQGEGPVK DPLNGSNMME EDVPTSKEGM EITHFYQTDQ NKISPEDVNM MEDDAPIWRE  660
GMDVTQFFQT DQLFDSRDAA FEWCQEVARE NNTRIIIRKS ETKPEGKGSF VLFACNRSGV  720
YRYTSCTPDA RKRQRRETKK CGCPFKVRGT CLPENKWRLR VLCGRHNHEA ENIPLPLFNR  780
DVDQLVVKLT ASGARPRQVV EALKQKNKDC LVSAKDIYNR RSSLKRHVAE KMSVMEQVMK  840
LSTQYHYMVW YRKDEETNEL KDIVWAHPES TLLAKCFPSM LMIDCTYKTN RFKVPFFHVA  900
GISSLGTPFT VAYAFIEEET KEHFSWALTQ LKSLFFPHSL PSVCVMNGDH PLINAVRSVF  960
PEAKRLLCTL HIGECVVTNC RKAISDDKEW DDFHRDWECV LKSETKEDFA DTYTEFVTTW  1020
VTRYPTCIKY IRDTWIVHKE SFILCWTRKI KHFGYKEVST DESEHEQLRK HMESSTSTTG  1080
FFRCWEAMHS IVKDQINQIS ASNEKSLTYI NRKHQIPAFG ELKNHVSQHA LDLILLELEQ  1140
LAVVESQKDI PQRALKLRQP ECNQSVDTST GIISCWCLIS YMHGLPCAHE VHNYIQDGRP  1200
IPLSAIDQQW KQLSVVLSLN DNLDFICLPE VQLLQERWME ASESDRSLLQ EQMKEVASSC  1260
DLAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-18	FAR1 family protein