PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446411.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 411aa MW: 45939.9 Da PI: 4.2875

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	115.8	2.6e-36	130	233	1	97
DUF573 1 klfqrlwseeDeivlLqGlidf.kaktgk......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 klfqrlw++eDei lLqG+ ++ ++++g+ s+++d+ fy+++k +++++++k+qlveK+rrLKkK+++ +++++sgk+ +f+++hdq++ XP_026446411.1 130 KLFQRLWTDEDEIGLLQGFFEYnTKQRGTgtknssSYHHDTGPFYDQIKTKLQLEFNKNQLVEKLRRLKKKYRNVMSRVSSGKDLVFKTPHDQSC 224 579*****************54455656688755667**************************************************** PP DUF573 89 felskkiWg 97 fe+skkiWg XP_026446411.1 225 FEISKKIWG 233 ******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MPEEEDQNMN TNQEEEEDFD DEDEELEEDE DMEEYDEDED EDLELDSPTT SSDPIPQQPT 60 IPNIATTTPV VSTSVSTTTT TTPAIATTIT TTQTGGEPEI KRQKIEEPIT PMTITTTTEE 120 RKPPSTEERK LFQRLWTDED EIGLLQGFFE YNTKQRGTGT KNSSSYHHDT GPFYDQIKTK 180 LQLEFNKNQL VEKLRRLKKK YRNVMSRVSS GKDLVFKTPH DQSCFEISKK IWGAEAGGDV 240 VVSGGGVEEE DGNPNPLQIV EVKNVTLGNN GGVAADINGS EKQAIPRSRK RIRKRTEVPP 300 NVSNPSNIPV NFSVSSVIEE TVKSCLSPLF KELLQSAING PNNVRGLGVM GLNPFNFGAN 360 SSSSMNLLSG EMVDEKWKKQ QVLELEVYAK RMDLVQDQIK LALEELRSTG D

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MPEEEDQNMN TNQEEEEDFD DEDEELEEDE DMEEYDEDED EDLELDSPTT SSDPIPQQPT  60
IPNIATTTPV VSTSVSTTTT TTPAIATTIT TTQTGGEPEI KRQKIEEPIT PMTITTTTEE  120
RKPPSTEERK LFQRLWTDED EIGLLQGFFE YNTKQRGTGT KNSSSYHHDT GPFYDQIKTK  180
LQLEFNKNQL VEKLRRLKKK YRNVMSRVSS GKDLVFKTPH DQSCFEISKK IWGAEAGGDV  240
VVSGGGVEEE DGNPNPLQIV EVKNVTLGNN GGVAADINGS EKQAIPRSRK RIRKRTEVPP  300
NVSNPSNIPV NFSVSSVIEE TVKSCLSPLF KELLQSAING PNNVRGLGVM GLNPFNFGAN  360
SSSSMNLLSG EMVDEKWKKQ QVLELEVYAK RMDLVQDQIK LALEELRSTG D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-64	GeBP family protein