PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446409.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 630aa MW: 68538.2 Da PI: 6.3837

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	307	365	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt+a +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_026446409.1 307 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAaQCPVRKQVQRCAEDRTILITTYEGTHNHP 365 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MMDEDDEDEF STVLLSNHHH HRHHHPAAVV VDSSSSSLPP PIQDADDVDQ KPALKEFNFF 60 SSDNNGSTGK QTHDVHEPVE TANTGLCLLT ETGCNSSAEI EEKPQAQQVR MIEVEVNRLK 120 EENTNLKHML DHITNSYNHL QSQVLQIMQQ QQERDELINR VPEERRIGNG RTGCNPTSSS 180 QPQPMDSDNF HPATSSSYRG QIMQPPIEIN HHRRSTRSHF RAVTEPKDQL ASPSTNNSKQ 240 ERCYDHSGGD DVSDDHTVQQ VSRNLRRSSV DSVQNMSMDQ QQEVPEVVHF RKARVSVRAR 300 SDAPMISDGC QWRKYGQKLA KGNPCPRAYY RCTMAAQCPV RKQVQRCAED RTILITTYEG 360 THNHPLPPAA TAMANTTSAA ATMLLSGSST SNYHNSHGFI SSSPAFPYLN TSTMAASLSS 420 SAPFPTITLD LTQQINSTSA TTQINHQHHQ NNPNVMQLNG QTGLMPSSQS SSLVQALLNG 480 GVGSHGFSAM QLLEQQQSAH AMSSLAGSSS GSQGVHLNGQ HAPSSSTSLV ETVITAAIAN 540 DPNLSAALTA AISSIIAAGG PPERSNHTPI TNNNDNDIPT GNNISNHTTS SFLPANSATN 600 VIDHGVVNPA GLHQQQQHPE QSCTTTFDPL

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MMDEDDEDEF STVLLSNHHH HRHHHPAAVV VDSSSSSLPP PIQDADDVDQ KPALKEFNFF  60
SSDNNGSTGK QTHDVHEPVE TANTGLCLLT ETGCNSSAEI EEKPQAQQVR MIEVEVNRLK  120
EENTNLKHML DHITNSYNHL QSQVLQIMQQ QQERDELINR VPEERRIGNG RTGCNPTSSS  180
QPQPMDSDNF HPATSSSYRG QIMQPPIEIN HHRRSTRSHF RAVTEPKDQL ASPSTNNSKQ  240
ERCYDHSGGD DVSDDHTVQQ VSRNLRRSSV DSVQNMSMDQ QQEVPEVVHF RKARVSVRAR  300
SDAPMISDGC QWRKYGQKLA KGNPCPRAYY RCTMAAQCPV RKQVQRCAED RTILITTYEG  360
THNHPLPPAA TAMANTTSAA ATMLLSGSST SNYHNSHGFI SSSPAFPYLN TSTMAASLSS  420
SAPFPTITLD LTQQINSTSA TTQINHQHHQ NNPNVMQLNG QTGLMPSSQS SSLVQALLNG  480
GVGSHGFSAM QLLEQQQSAH AMSSLAGSSS GSQGVHLNGQ HAPSSSTSLV ETVITAAIAN  540
DPNLSAALTA AISSIIAAGG PPERSNHTPI TNNNDNDIPT GNNISNHTTS SFLPANSATN  600
VIDHGVVNPA GLHQQQQHPE QSCTTTFDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	3e-51	WRKY family protein