PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446353.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

CAMTA

Protein Properties

Length: 1033aa MW: 115272 Da PI: 7.2833

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.6	7.6e-56	20	134	3	117
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + k rwl+++e+++iL n++++ +t +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++fqrr XP_026446353.1 20 EAKLRWLRPNEVCEILRNYQRFIITPDPPYKPSGGSLFLFDRKALRYFRKDGHNWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRR 114 4499***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylev 117 cyw+L+++le+ivlvhy+e XP_026446353.1 115 CYWMLDTQLEHIVLVHYREI 134 ***************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1033 aa Download sequence
MNCLFSRWSL HEYISQILAE AKLRWLRPNE VCEILRNYQR FIITPDPPYK PSGGSLFLFD 60 RKALRYFRKD GHNWRKKKDG KTVREAHEKL KAGSVDVLHC YYAHGEDNEN FQRRCYWMLD 120 TQLEHIVLVH YREIKEGNRS GISHLVNADL GAPAGTARAY PAPSAQVDST GRTIQASYAS 180 SPSTAEWNGQ TRSSEFEDVD SRTDQETSSS SRAMSCSRSQ NSSLHSSDIA GFPVVSRSSH 240 GAGFRGGIFD HDNCHSLCPE AHCSIRNIGC MPDERIPFNQ PERTEAVSRL TAAALETCSL 300 VKDELGDANM VLPDTHFHTL RRGSETPVQE CPSNKDGQTR YVISNNLAVG GAAAHIFQFP 360 QDHNFQLLHL HFQNKPGAPM LDNDNDIPLV EKATLENESH KNGEARELKK LDSFGRWMNE 420 EIGVDCEDSL MASDSGNYWN TLDTQKDDKE VSSLSRHMQL DIDSPSPSLS HDQLFSIRDF 480 SPDWAFSGVE TKVLITGSFL RDQKHLSSKK WCCMFGEVEV PAEILTDTVL RCQAPVHSLG 540 RVPFYITCSN RLACSEVREF EYRENASEPS PLAVKIEGEE EASIQVRMAK MLYLGLDREL 600 LNCSVQNCVK CALRNVSSSF GSDEEKEWGE IEEASVSGNR KNPKDALIEK LLKDRLYEWL 660 VSKIHEGGRG ANVLDAKGQG VIHLAASLGY GWAMAAIVAA GVSPNFRDAQ GRTGLHWAAH 720 YGREETVVAL VKLGAAPGAV EDPTSKFPGG RTAADLASSR GHKGIAGYLA EADLTSHLSL 780 MTIKESVIDS VAASIAAEKA IETVEEQSIA PDQSKEGLFS MRSSREAVKK SAQAADLIKA 840 AFARSFHHKK ESVKIKDEIS EIPADIVTVA SFTNKVSSMN HFTDYLHSAS AALKIQHKYR 900 GWKARKDFLK IRNRIVKIQA VVRGHQARTY YKKVLWSVGI VEKVILRWRR KGPGFRGFCA 960 DKSIGNTLPD NEKIDEYDFL REGRKQKVAG VEKALARVQS MARYPESRDQ YMRLKSSEKG 1020 IENENITAVT NHD

Sequence ? help Back to Top

Protein Sequence Length: 1033 aa Download sequence

MNCLFSRWSL HEYISQILAE AKLRWLRPNE VCEILRNYQR FIITPDPPYK PSGGSLFLFD  60
RKALRYFRKD GHNWRKKKDG KTVREAHEKL KAGSVDVLHC YYAHGEDNEN FQRRCYWMLD  120
TQLEHIVLVH YREIKEGNRS GISHLVNADL GAPAGTARAY PAPSAQVDST GRTIQASYAS  180
SPSTAEWNGQ TRSSEFEDVD SRTDQETSSS SRAMSCSRSQ NSSLHSSDIA GFPVVSRSSH  240
GAGFRGGIFD HDNCHSLCPE AHCSIRNIGC MPDERIPFNQ PERTEAVSRL TAAALETCSL  300
VKDELGDANM VLPDTHFHTL RRGSETPVQE CPSNKDGQTR YVISNNLAVG GAAAHIFQFP  360
QDHNFQLLHL HFQNKPGAPM LDNDNDIPLV EKATLENESH KNGEARELKK LDSFGRWMNE  420
EIGVDCEDSL MASDSGNYWN TLDTQKDDKE VSSLSRHMQL DIDSPSPSLS HDQLFSIRDF  480
SPDWAFSGVE TKVLITGSFL RDQKHLSSKK WCCMFGEVEV PAEILTDTVL RCQAPVHSLG  540
RVPFYITCSN RLACSEVREF EYRENASEPS PLAVKIEGEE EASIQVRMAK MLYLGLDREL  600
LNCSVQNCVK CALRNVSSSF GSDEEKEWGE IEEASVSGNR KNPKDALIEK LLKDRLYEWL  660
VSKIHEGGRG ANVLDAKGQG VIHLAASLGY GWAMAAIVAA GVSPNFRDAQ GRTGLHWAAH  720
YGREETVVAL VKLGAAPGAV EDPTSKFPGG RTAADLASSR GHKGIAGYLA EADLTSHLSL  780
MTIKESVIDS VAASIAAEKA IETVEEQSIA PDQSKEGLFS MRSSREAVKK SAQAADLIKA  840
AFARSFHHKK ESVKIKDEIS EIPADIVTVA SFTNKVSSMN HFTDYLHSAS AALKIQHKYR  900
GWKARKDFLK IRNRIVKIQA VVRGHQARTY YKKVLWSVGI VEKVILRWRR KGPGFRGFCA  960
DKSIGNTLPD NEKIDEYDFL REGRKQKVAG VEKALARVQS MARYPESRDQ YMRLKSSEKG  1020
IENENITAVT NHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein