PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445946.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 494aa MW: 54918.8 Da PI: 9.3344

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.2e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026445946.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 204 78*****************......55**********************997 PP
2	AP2	42.9	1.2e-13	247	297	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_026445946.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 297 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
METTLDLNDS SRQTSMEDVE IIEEVEKGKG IGSVSNSSSS SVSQEDESLK RKSSKIFGFS 60 VTHDCSSTEI GEPMITRQFF PMEESDNSTT ITGASTGGGG GFNTSSSSST SFPRAHWVGV 120 KFCQTEPVGA SKTSMEVISQ QPLKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHA AARAYDRAAI KFRGVEADIN FTLNDYEDDL KQMTNLTKEE FVHVLRRQST 240 GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EVEAARAYDK AAIKCNGKEA 300 VTNFDPSIYD SELNAGAGSN KDHSLDLCLG SSASTLEFKG NQPLPKFQSQ PNRSNRGFKL 360 KLQDEQFRNN NPYFQTSTNE LSRYEQLRVI GESPIFHHLQ PPSHPQNYQL SSSSGSNGGS 420 RVKVDTIEQL QRRQQWSSSS TSNKSNSNGW PCYISPSQPM FATTAASSGF PSQVIKTPSW 480 FPKINGFQSL KRPT

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

METTLDLNDS SRQTSMEDVE IIEEVEKGKG IGSVSNSSSS SVSQEDESLK RKSSKIFGFS  60
VTHDCSSTEI GEPMITRQFF PMEESDNSTT ITGASTGGGG GFNTSSSSST SFPRAHWVGV  120
KFCQTEPVGA SKTSMEVISQ QPLKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTAHA AARAYDRAAI KFRGVEADIN FTLNDYEDDL KQMTNLTKEE FVHVLRRQST  240
GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EVEAARAYDK AAIKCNGKEA  300
VTNFDPSIYD SELNAGAGSN KDHSLDLCLG SSASTLEFKG NQPLPKFQSQ PNRSNRGFKL  360
KLQDEQFRNN NPYFQTSTNE LSRYEQLRVI GESPIFHHLQ PPSHPQNYQL SSSSGSNGGS  420
RVKVDTIEQL QRRQQWSSSS TSNKSNSNGW PCYISPSQPM FATTAASSGF PSQVIKTPSW  480
FPKINGFQSL KRPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-120	AP2 family protein