PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445939.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 457aa MW: 50368.8 Da PI: 6.4179

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.2	9.2e-16	208	254	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq XP_026445939.1 208 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 254 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MYEPCSSSSS SSSTTTTTSL ACPVLESDEI SLFVQHLFHS SSSSTITCTS SSSSSIKQMP 60 LSAQFAKSFQ EDQQNRSCLT NHLPDHTHHN RNIHSDFRLR NDSSNLFLSS SAAAGSLYFP 120 SASSSEIIKD STTTTTTVIS DTGGVNRDFD QKDSDAVNVS VKRRKFPVDN IDLDDYDGES 180 EEGLEGSEGP SKTVPSRSSS KRSRAAEVHN LSEKRRRSRI NEKMKALQNL IPNSNKTDKA 240 SMLDEAIEYL KQLQLQVQML SMRNGLSLHP LYLPGVLQPP QMTQMRNMSF GEGNALPQHM 300 NIGTGTHPAS QEAQNSFALS NQSTALHQPM VLPNMTNIAL PTTSFGLDSS LIQLHHGQFQ 360 LSTASEEIYR EDVPLPQQLH KSISTRNASA SVPFDSRSSI VENTDTVESS VARGNRPQAM 420 LPKDVTDDQN FIQHMHNIHT RSLMDDDGKI KTKTVDF

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MYEPCSSSSS SSSTTTTTSL ACPVLESDEI SLFVQHLFHS SSSSTITCTS SSSSSIKQMP  60
LSAQFAKSFQ EDQQNRSCLT NHLPDHTHHN RNIHSDFRLR NDSSNLFLSS SAAAGSLYFP  120
SASSSEIIKD STTTTTTVIS DTGGVNRDFD QKDSDAVNVS VKRRKFPVDN IDLDDYDGES  180
EEGLEGSEGP SKTVPSRSSS KRSRAAEVHN LSEKRRRSRI NEKMKALQNL IPNSNKTDKA  240
SMLDEAIEYL KQLQLQVQML SMRNGLSLHP LYLPGVLQPP QMTQMRNMSF GEGNALPQHM  300
NIGTGTHPAS QEAQNSFALS NQSTALHQPM VLPNMTNIAL PTTSFGLDSS LIQLHHGQFQ  360
LSTASEEIYR EDVPLPQQLH KSISTRNASA SVPFDSRSSI VENTDTVESS VARGNRPQAM  420
LPKDVTDDQN FIQHMHNIHT RSLMDDDGKI KTKTVDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	2e-40	bHLH family protein