PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445834.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 175aa MW: 20308.1 Da PI: 10.0843

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.2	2.2e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kR+ng+lKKA E+S+LCda+v+v++fs+ g++ eyss XP_026445834.1 9 KRIENSTNRQVTFAKRKNGLLKKAREISILCDADVSVVMFSEAGNMTEYSS 59 79***********************************************96 PP
2	K-box	64.1	5.1e-22	69	162	1	94
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 yqk sgk l++ k+e+l+ e+++++ke++nLq+e+Rhl+GedL++Ls +eL+ Le++Le++ R+k +e+ ++ ++ + e+e+++ + XP_026445834.1 69 YQKESGKTLWDVKHERLSAEIDRVRKENSNLQTELRHLKGEDLKPLSPQELHALENALEDGYACPRAKIKEHHRKLKKNGRLLEEENKRLSFTY 162 8999****************************************************************87776665555555555555555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGRGKTELKR IENSTNRQVT FAKRKNGLLK KAREISILCD ADVSVVMFSE AGNMTEYSSS 60 PLIEQLARYQ KESGKTLWDV KHERLSAEID RVRKENSNLQ TELRHLKGED LKPLSPQELH 120 ALENALEDGY ACPRAKIKEH HRKLKKNGRL LEEENKRLSF TYQQQQQNKW NMGAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	1e-56	MIKC_MADS family protein