PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445765.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 976aa MW: 110353 Da PI: 7.7627

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.3	2e-26	280	369	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YAke GFs+rks+ ++s+ ++++++r++vC ++g+r++++++ + k r+r etr++C+a + +k++ + kw v+k+++eHnH l+ XP_026445765.1 280 EFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGFRSTNDRRyKGKVVRPRRETRVDCRAAMSIKRR-STKWIVDKFHKEHNHGLV 369 6***************************************999886778899**************.9************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MKNKEKNPTS PPQTTNQQPL LQPNPHPHPH PPYTFMPSFY PPPPPWSTFP GPWSVTPPPS 60 GFPLTMPIPT PPHNLPQHPA SGHSLPSPPP PPYAFWPPPP PMMMGPVIST SQNHIAVPTT 120 GNTQESIVPP TGLHRAEGKV PPEHQHSEQA LNSPLRRRPV TRRSAAQDLA TDNASSPGLD 180 QLLDTASPSL TATKGSQSRR LRSQKIKDKE EKSNAGQQDK VEGDAAFVDE NNSMDVTGSL 240 EEVDITAETS GREDDNVPLP KLGSEPFVGL RFSSEDEAYE FYNAYAKEKG FSIRKSHIQR 300 SRVDRSVISR EYVCANQGFR STNDRRYKGK VVRPRRETRV DCRAAMSIKR RSTKWIVDKF 360 HKEHNHGLVD PAKAEKLRSH RKITQTTKSV IDTLYKCRIG PSKIIDVLTK AASEENTVEI 420 SGLDLMKYVK RKPKNNIAAD CYRVLEYFQK IQAVDPGFFY AVEVGDSRSM RSMFWADSRS 480 RDAYKQFGDV MVFDHVCRTN KDLFPFVSFV GVNHHRQPVL FGCGLLADET VESFVWLFKT 540 LLRAMSNCHP TSVITKQDKA IMIAMGKVFP NTRQRICMLH VEKNELENLS DVFNMHPAFQ 600 EEYKRCIYNC QKPEEFESGW KQLLVKYNLK ENSWLYGMYD QRHNWVPLYL RNTFFAGMST 660 TQLAEGMNSY FDGFLHEGTP LNEFIEQYEL AVVRRREEET DEDFITMYTS AGSSSKNPIE 720 EQAAKVYTRN MFTLFGHEFS ESSGCIVRKV DDEDECTSRY LVGKYGDKDD EMSFVTFNSI 780 NKDTNCSCQM FEFEGILCKH VLKLFQDLNV VELPAKYTLK RWTMIARYGG PCGDEAECIS 840 EDTTTVNVWM LKETAVKFVE IGLSSADRNS AAMNIIEEGL KNISLVNSST NDLHPEDSVG 900 SSDQGEKLID TTSSEPQPIK TKERQASVKE KLGVKQVMKK NRKCSTCKKS GHYTSTCPKG 960 PVDQSQTSAN GDQRQA

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MKNKEKNPTS PPQTTNQQPL LQPNPHPHPH PPYTFMPSFY PPPPPWSTFP GPWSVTPPPS  60
GFPLTMPIPT PPHNLPQHPA SGHSLPSPPP PPYAFWPPPP PMMMGPVIST SQNHIAVPTT  120
GNTQESIVPP TGLHRAEGKV PPEHQHSEQA LNSPLRRRPV TRRSAAQDLA TDNASSPGLD  180
QLLDTASPSL TATKGSQSRR LRSQKIKDKE EKSNAGQQDK VEGDAAFVDE NNSMDVTGSL  240
EEVDITAETS GREDDNVPLP KLGSEPFVGL RFSSEDEAYE FYNAYAKEKG FSIRKSHIQR  300
SRVDRSVISR EYVCANQGFR STNDRRYKGK VVRPRRETRV DCRAAMSIKR RSTKWIVDKF  360
HKEHNHGLVD PAKAEKLRSH RKITQTTKSV IDTLYKCRIG PSKIIDVLTK AASEENTVEI  420
SGLDLMKYVK RKPKNNIAAD CYRVLEYFQK IQAVDPGFFY AVEVGDSRSM RSMFWADSRS  480
RDAYKQFGDV MVFDHVCRTN KDLFPFVSFV GVNHHRQPVL FGCGLLADET VESFVWLFKT  540
LLRAMSNCHP TSVITKQDKA IMIAMGKVFP NTRQRICMLH VEKNELENLS DVFNMHPAFQ  600
EEYKRCIYNC QKPEEFESGW KQLLVKYNLK ENSWLYGMYD QRHNWVPLYL RNTFFAGMST  660
TQLAEGMNSY FDGFLHEGTP LNEFIEQYEL AVVRRREEET DEDFITMYTS AGSSSKNPIE  720
EQAAKVYTRN MFTLFGHEFS ESSGCIVRKV DDEDECTSRY LVGKYGDKDD EMSFVTFNSI  780
NKDTNCSCQM FEFEGILCKH VLKLFQDLNV VELPAKYTLK RWTMIARYGG PCGDEAECIS  840
EDTTTVNVWM LKETAVKFVE IGLSSADRNS AAMNIIEEGL KNISLVNSST NDLHPEDSVG  900
SSDQGEKLID TTSSEPQPIK TKERQASVKE KLGVKQVMKK NRKCSTCKKS GHYTSTCPKG  960
PVDQSQTSAN GDQRQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-153	FAR1 family protein