PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026445718.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 390aa    MW: 45355.6 Da    PI: 8.3551
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026445718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.97e-1845127187
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                     +fY +YA ++GFs +k++ k+  ++g     t+ C+kegk+++ +++     +  +++rt+Ckak+  ++ +d+kw+++ + leHnH
  XP_026445718.1  45 EFYISYAFKTGFSCKKRTCKRD-HHGALNFVTYSCTKEGKNHSVSDS---PLNLPPTQRTNCKAKISARLCEDEKWMISVIALEHNH 127
                     6***************999998.8888***************99877...889999******************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MGESQSASEE FEQHNSAVND DNDQGDQIVL PKLGMKFNNA DDLFEFYISY AFKTGFSCKK  60
RTCKRDHHGA LNFVTYSCTK EGKNHSVSDS PLNLPPTQRT NCKAKISARL CEDEKWMISV  120
IALEHNHLNS PSKSRYLRGH KRINTTTKKK VLVNVKAGIR MNKIYGALAV EGGGYESLFY  180
DEKTLRNMVA REKKLELGEG DATTLLNHFT NMQNRDPNFF YRMDIDETGC LKNVFWADNR  240
CRESYKEFGE VVTFDTTYLT NKYEMPFAPF VGVNHHGQSI LFGCGLLSNE EKETFAWLFR  300
SWLDCMNGIA PQGIITDQCS SMKWAVERVF KDTKHRWCLW HIMKKIPEKL RRYENYLRIK  360
CRMKKAVYDT QCPAEFEQHW SDMLQKYESL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-69FAR1 family protein