PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026445306.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRF
Protein Properties Length: 357aa    MW: 39507.7 Da    PI: 9.5647
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026445306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC60.82.2e-1996134139
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 
                     d+epgrCrRtDGKkWRC +++ + +k+CErH+ + ++++
  XP_026445306.1  96 DPEPGRCRRTDGKKWRCAKDAFPESKYCERHMRKRKNNN 134
                     79*******************************999886 PP
2QLQ44.64.5e-162054236
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                     FT +Q+ +L +Q+l++KyL+++ +vPpeLl++i 
  XP_026445306.1 20 IFTVSQWKELQHQALIFKYLLSGHQVPPELLLPIH 54
                    59*******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MFEMSRGGIG GRGRDPVAAI FTVSQWKELQ HQALIFKYLL SGHQVPPELL LPIHNSSFYF  60
DSTSSSSPSN FFLTSATATT PMEGYYASSY YGKKMDPEPG RCRRTDGKKW RCAKDAFPES  120
KYCERHMRKR KNNNAGSRKP VEIHTSLSSM PTTPSLSRIS ALTSLSTGGG SGMTTANNGG  180
SFFPLLSMGN NNDQRYSYAT KSQTSENGFF LNTSRSAKGF GMQSSLDNTY GSILPQATLV  240
SPSKLRNGSL SLSDYPQALT LQDLRYATST NNQPKQPARQ QYWSFDSESA SRDTMKHDNQ  300
SLQVQSSYEE WPNKTRDYWL DQNDNSDHSP FSTTTQLSMS MPVASFGSSA ASSHSPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.17e-30GRF family protein