PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445147.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 738aa MW: 83596.2 Da PI: 8.2771

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.0004	22	41	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++Cgk +r+ L++H+ XP_026445147.1 22 FRCNYCGKEITRRCRLQNHL 41 89*****************8 PP
2	zf-C2H2	10.9	0.0014	93	111	2	20
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 kC++Cgk ++ + Lk+H+ XP_026445147.1 93 KCNYCGKEVTTCHRLKNHL 111 7*****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 738 aa Download sequence
MATLTVVIDD HCTVVDREKR RFRCNYCGKE ITRRCRLQNH LAGIREKVLP CDEVPAEVRA 60 QMKNEIMRRK KAVENTSSKN HCTLVDKKKK RVKCNYCGKE VTTCHRLKNH LAGIRENVLP 120 CDEVPEKVRA RMRNGIMRRK QADADASSNN PLKQNGELHE SSQPSLSKKR KHCAIIESGL 180 KEKDENTQSL IDHKQLNAGK IAKVAQDSSS RQLQRCIGRF FFENGIDFSA ANSPYFQKMI 240 RALIGCGSVV YKVPSCDDLK GWILQEELKA SEEHVREILH SWGSTGCSIL LDGWTDGKGR 300 DFINFVVDSP KGPIFMKSAD VSDIVGDVDA MIALLIGVIE EVGVQNVVQI VSYTTLGSVG 360 VAGKKLTEKY GTISWTVCAS HCIGLILDKI AMLNPWRGVL GKAKDIIKFI CSHEIVLKLT 420 RKHTFGLDIV SSRRISSLTP FLMLERIESQ KMNLKNMFSS LEWKKSTLAS TVDGMQVVDL 480 VSGESSFWTE AQMLLKGSIP LIRALHLISG GDSKPQLGYI YETMKQVKEQ IKEEFNDNET 540 KYQPFWTVID AIWNNQLHKP IHSAAYILNP SLFYCVDFND DAEIKDGLSH CIEQMVEDKR 600 ARYLTLLQLD DYMQTRGTFG DGDAIDQRMT ISPEKWWSLY GGECPELQTF AIRILSQTCT 660 GALRYGLKRS LPEQLHMNGR NCVEQKRLND LTFVHHNLRL QNAVSVSKTD YRDIFLEEMD 720 HPVVEWVRGG DVKESVAE

Sequence ? help Back to Top

Protein Sequence Length: 738 aa Download sequence

MATLTVVIDD HCTVVDREKR RFRCNYCGKE ITRRCRLQNH LAGIREKVLP CDEVPAEVRA  60
QMKNEIMRRK KAVENTSSKN HCTLVDKKKK RVKCNYCGKE VTTCHRLKNH LAGIRENVLP  120
CDEVPEKVRA RMRNGIMRRK QADADASSNN PLKQNGELHE SSQPSLSKKR KHCAIIESGL  180
KEKDENTQSL IDHKQLNAGK IAKVAQDSSS RQLQRCIGRF FFENGIDFSA ANSPYFQKMI  240
RALIGCGSVV YKVPSCDDLK GWILQEELKA SEEHVREILH SWGSTGCSIL LDGWTDGKGR  300
DFINFVVDSP KGPIFMKSAD VSDIVGDVDA MIALLIGVIE EVGVQNVVQI VSYTTLGSVG  360
VAGKKLTEKY GTISWTVCAS HCIGLILDKI AMLNPWRGVL GKAKDIIKFI CSHEIVLKLT  420
RKHTFGLDIV SSRRISSLTP FLMLERIESQ KMNLKNMFSS LEWKKSTLAS TVDGMQVVDL  480
VSGESSFWTE AQMLLKGSIP LIRALHLISG GDSKPQLGYI YETMKQVKEQ IKEEFNDNET  540
KYQPFWTVID AIWNNQLHKP IHSAAYILNP SLFYCVDFND DAEIKDGLSH CIEQMVEDKR  600
ARYLTLLQLD DYMQTRGTFG DGDAIDQRMT ISPEKWWSLY GGECPELQTF AIRILSQTCT  660
GALRYGLKRS LPEQLHMNGR NCVEQKRLND LTFVHHNLRL QNAVSVSKTD YRDIFLEEMD  720
HPVVEWVRGG DVKESVAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	90	RRKKAVENTSSKNHCTLVDKKKK
2	69	91	RRKKAVENTSSKNHCTLVDKKKK