PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444890.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 638aa MW: 71789.5 Da PI: 9.9109

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1.1e-08	10	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT E+ l+ +v+++G g Wk I + Rt ++k++w++ XP_026444890.1 10 KLKWTLPEEAALKSGVNKHGAGKWKNIVSDPEfgpflVSRTNVDLKDKWRNM 61 689************************99999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MVDPITPRRK LKWTLPEEAA LKSGVNKHGA GKWKNIVSDP EFGPFLVSRT NVDLKDKWRN 60 MTGESSYRPK VKLVPTTTFS KSPKSAICNP ADVYTEVKWR GNRADCVPAV VEIIDCFENS 120 RKQDACDEST VSDTGASEGS VEISSSNRSR DEISGMMDNS CNGSLGASAK RNGSLYPIEV 180 LVAAIELIDS HELVRVSEVP TEDILVPDNP KENKLAVPNF LRKRFREKPP QNYAIQKKAV 240 KKFKSSSMVD SSNFDTLMMA VNYVSKNDND EPEEKETHSL LDNAEKQSEA VLVNKSVAVS 300 SGIHQVLGDM SANSAEDRSL RIRKLASFEL SILPEGNTLV SDRLLGIKKL TSFKLGSLQE 360 GNTSIRKSSK VCSSYNKGFS CRNNDQQRAY MSAEKSCREQ CLLMANSHGG NMRGCENRQT 420 SNMTSEQQRL QKNFCWRERR KRLDTEAEAY ILKDRRRQHS FLLQHPSTNS QKLQAPPAIM 480 GQHVKSECQV LGHDTSVKIS SNGFPSYNEK GFAQTVCDRS ASQKATQQRR RASIYAKKSV 540 KKLEEHQCLL KRLRRRFLEQ NDVGMGQMHR QTTSKLQVIC TDHIILSAFI LHGNGIQNNI 600 QPFNFMKVEI EVVKKRNYGG TQRFIGLEKN GLQSPFHR

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MVDPITPRRK LKWTLPEEAA LKSGVNKHGA GKWKNIVSDP EFGPFLVSRT NVDLKDKWRN  60
MTGESSYRPK VKLVPTTTFS KSPKSAICNP ADVYTEVKWR GNRADCVPAV VEIIDCFENS  120
RKQDACDEST VSDTGASEGS VEISSSNRSR DEISGMMDNS CNGSLGASAK RNGSLYPIEV  180
LVAAIELIDS HELVRVSEVP TEDILVPDNP KENKLAVPNF LRKRFREKPP QNYAIQKKAV  240
KKFKSSSMVD SSNFDTLMMA VNYVSKNDND EPEEKETHSL LDNAEKQSEA VLVNKSVAVS  300
SGIHQVLGDM SANSAEDRSL RIRKLASFEL SILPEGNTLV SDRLLGIKKL TSFKLGSLQE  360
GNTSIRKSSK VCSSYNKGFS CRNNDQQRAY MSAEKSCREQ CLLMANSHGG NMRGCENRQT  420
SNMTSEQQRL QKNFCWRERR KRLDTEAEAY ILKDRRRQHS FLLQHPSTNS QKLQAPPAIM  480
GQHVKSECQV LGHDTSVKIS SNGFPSYNEK GFAQTVCDRS ASQKATQQRR RASIYAKKSV  540
KKLEEHQCLL KRLRRRFLEQ NDVGMGQMHR QTTSKLQVIC TDHIILSAFI LHGNGIQNNI  600
QPFNFMKVEI EVVKKRNYGG TQRFIGLEKN GLQSPFHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72740.2	1e-18	MYB_related family protein