PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026444657.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 176aa MW: 20580.2 Da PI: 9.1434 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.5 | 4.7e-35 | 15 | 175 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Ptdee++ +yLk+kv ++kl+ ++i++vd+yk++P +L + + +++++ewyfF+++ ++++t r++r+t +gyW a+ dke++ XP_026444657.1 15 LPPGFRFKPTDEEILLDYLKPKVMNQKLTP-NMINSVDLYKYNPITLTEtfEKRKDDDEWYFFTTTTRTSQTTGRTSRTTPDGYWLASQGDKEIT 108 79*************************998.89**************85234445677************************************* PP NAM 94 skkgel....................vglkktLvfy............kgrapkgektdWvmheyrl 128 ++g++ +g +ktLv+y + ++ g+ktdW+m ey l XP_026444657.1 109 LTRGRAapvdnqenpkkrkttadddvIGYRKTLVYYftkknkpdcrrkSSKKDAGVKTDWIMYEYDL 175 99444455556666777778888888**********99998888876556889999*********87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence |
MSSGVEDEVH LNMMLPPGFR FKPTDEEILL DYLKPKVMNQ KLTPNMINSV DLYKYNPITL 60 TETFEKRKDD DEWYFFTTTT RTSQTTGRTS RTTPDGYWLA SQGDKEITLT RGRAAPVDNQ 120 ENPKKRKTTA DDDVIGYRKT LVYYFTKKNK PDCRRKSSKK DAGVKTDWIM YEYDLT |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 124 | 150 | KKRKTTADDDVIGYRKTLVYYFTKKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G39610.1 | 9e-24 | NAC family protein |