PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026444215.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 522aa MW: 60243.3 Da PI: 6.9501

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026444215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.1	2e-28	131	183	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 prlrWt++LH++F+++ve++GG+e+AtPk +l+lm+vkgL+++hvkSHLQ Y+ XP_026444215.1 131 PRLRWTSDLHHSFIHCVERIGGQERATPKLVLQLMNVKGLSIAHVKSHLQVYK 183 8***************************************************7 PP
2	Myb_DNA-binding	42	2.2e-13	132	183	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++++v++ Gg t+k++ + m+ kg++ ++ks++q y+ XP_026444215.1 132 RLRWTSDLHHSFIHCVERIGGQeraTPKLVLQLMNvKGLSIAHVKSHLQVYK 183 89***********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MVTDQQRQEQ ICEDENQNSS SWSDNQVLLQ VTSATTSPPP RRGKKRSLSP CFDLNEDAMM 60 MSTDINDQMV NTIDQEEEDD ENNDSMTREN SLSSSNNNSE ANNNNNAVET GSCSDRTTTT 120 TVRQYVRSKM PRLRWTSDLH HSFIHCVERI GGQERATPKL VLQLMNVKGL SIAHVKSHLQ 180 VYKKIYSMMI DEMYRSKKLD ECGQVLSQTN MQGGHDQMYY HHHRTSHPQQ QPFRIDNYKN 240 FVQAQNMHDT SPNHLQYPLS QQQQFDHRDS CYPRHQEWGF SQNNHRMKPI PVQAADKGIG 300 IEQASHGMKI SSHLFDLRNA ISWNGPIRPN RFLEEKKWPP RQMMTSVNTM SSLSLELNND 360 NNTDKRFRSD SNYHRISSNS FQHPQFGLDK LTTVLAKERR DEMVENIDIM SSSCMGDKRE 420 QESMPNLQLS LSQNLRNSDD FFNNNNSSSS SSKLESCTTT RTKDQINSAL RLSLFPTNEE 480 TNEQQQQQRQ HTDRNSSTSN LWCLQRNSCS NSNNNQQASV RG

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MVTDQQRQEQ ICEDENQNSS SWSDNQVLLQ VTSATTSPPP RRGKKRSLSP CFDLNEDAMM  60
MSTDINDQMV NTIDQEEEDD ENNDSMTREN SLSSSNNNSE ANNNNNAVET GSCSDRTTTT  120
TVRQYVRSKM PRLRWTSDLH HSFIHCVERI GGQERATPKL VLQLMNVKGL SIAHVKSHLQ  180
VYKKIYSMMI DEMYRSKKLD ECGQVLSQTN MQGGHDQMYY HHHRTSHPQQ QPFRIDNYKN  240
FVQAQNMHDT SPNHLQYPLS QQQQFDHRDS CYPRHQEWGF SQNNHRMKPI PVQAADKGIG  300
IEQASHGMKI SSHLFDLRNA ISWNGPIRPN RFLEEKKWPP RQMMTSVNTM SSLSLELNND  360
NNTDKRFRSD SNYHRISSNS FQHPQFGLDK LTTVLAKERR DEMVENIDIM SSSCMGDKRE  420
QESMPNLQLS LSQNLRNSDD FFNNNNSSSS SSKLESCTTT RTKDQINSAL RLSLFPTNEE  480
TNEQQQQQRQ HTDRNSSTSN LWCLQRNSCS NSNNNQQASV RG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	41	47	RRGKKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-30	G2-like family protein