PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 194aa MW: 22504.9 Da PI: 8.9454 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 34.7 | 2.3e-11 | 10 | 52 | 2 | 44 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 i nk nr+ t+s R++++ K +E S LC++++++i++ +++ XP_026443636.1 10 YIANKKNRKKTYSERLKTLKKSIYEFSELCGVDACMIVYDPDQ 52 699****************999*****************8875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MGRAKLKMEY IANKKNRKKT YSERLKTLKK SIYEFSELCG VDACMIVYDP DQGKPEICPR 60 NMNEVQRITK RYLQIPKEKR DKLILDDKKK EKTREYDEMP MSRQVNGFSI KQLEQLHSKL 120 GSKIETLSEK IQSMDGGGAG MSNEAPQKEY PCYNPERASD HEPTVRTNGF VIPNLHGLCF 180 DLYTHCPLLV FSFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G05860.2 | 6e-15 | M-type_MADS family protein |