PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443436.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 194aa MW: 21659.7 Da PI: 9.6839

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00092	35	57	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H +H XP_026443436.1 35 YECKTCNRKFPSFQALGGHRASH 57 99**********99999998887 PP
2	zf-C2H2	12.5	0.00046	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H XP_026443436.1 86 HECSICGLEFSVGQALGGHMRKH 108 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MAMFLMLLSS GREEADYQSA VQPLTTSKIS QNRVYECKTC NRKFPSFQAL GGHRASHKKP 60 RLEESVFSGT QSINDNQQQK KKPKTHECSI CGLEFSVGQA LGGHMRKHRA VVSPEATPTA 120 TMGLSSSSSD TTTYKQQPLQ LVKRSNSRRL LSLNLDLSLT SLPTTITDSN EFEFSTLVEP 180 HKQISVPPMI YYFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53600.1	3e-29	C2H2 family protein