PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443403.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 310aa    MW: 35177.6 Da    PI: 7.3207
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.00065206251454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + n++  +R ++i +++ +L++l+ +      +K + a++L+ + ++Ik+L
  XP_026443403.1 206 TENQIRPKRSQKIGDRIITLQKLVSPF-----GKTDTASVLKDTSDHIKML 251
                     56777789*****************98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRNTVYPTLY VGNNDDQMLD SDISLHSTKP NHNSSDLQEQ NISVCEYNFF HESQLSNNQV  60
LGSFSPLSAI EIPSPLNYLT LPGLHPISDA SVSNIISSTT TAMYRDATVE QLYAQNLFSA  120
SLDNDRKRSI VKSDIGSATV EGSIKRMKNV VPIAMEEDDR HPQSQYFVDK RMSERTRGKQ  180
PKAQEKWLLE LEEAKAKQQQ FKGTQTENQI RPKRSQKIGD RIITLQKLVS PFGKTDTASV  240
LKDTSDHIKM LYNQIKMLTN SYFQPDAFLH YYHKHDLQVG VGEMSNGLAE RGLCLVPVSF  300
TQNITKEEKR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126148RKRSIVKSDIGSATVEGSIKRMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-20bHLH family protein