PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443255.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 432aa MW: 48501.8 Da PI: 6.7582

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166	1.3e-51	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yLkkkv+ +k++l +vi++vd++k+ePwd++ k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_026443255.1 15 VPPGFRFHPTEEELLHYYLKKKVAYEKIDL-DVIRDVDLNKLEPWDIQVKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 108 69**************************.9***********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_026443255.1 109 YS-SFKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143 .8889***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MSEDMSLSVN GQSQVPPGFR FHPTEEELLH YYLKKKVAYE KIDLDVIRDV DLNKLEPWDI 60 QVKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS SFKRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDDNAVES NVSSNSLIVE GIQEEGWVVC RVFKKKNHQK 180 SVDGPVNNNN SISSSSMMIS KTQLLNSTSG SDGALDQIIH YLGRTCKQES ENNTRFLRQF 240 GRVINDGAGV ISDRFMQLPA LESPTTLQSS SSLHHHTSNN RILDQEMDSI VYESSIISNQ 300 SNNIDEHIYE PAGGLSDWAA MDCVVASHLN NGQSETSKQF AAACFADSSS LGGFSTSSNE 360 NQELIHHYQS PPQQHQIRQL ATRPSSSMFQ TSHVIDYNSE IDLWNFAAGS NRYSSSSMTD 420 PLCSSHVSNP ST

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MSEDMSLSVN GQSQVPPGFR FHPTEEELLH YYLKKKVAYE KIDLDVIRDV DLNKLEPWDI  60
QVKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS SFKRIGMRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDDNAVES NVSSNSLIVE GIQEEGWVVC RVFKKKNHQK  180
SVDGPVNNNN SISSSSMMIS KTQLLNSTSG SDGALDQIIH YLGRTCKQES ENNTRFLRQF  240
GRVINDGAGV ISDRFMQLPA LESPTTLQSS SSLHHHTSNN RILDQEMDSI VYESSIISNQ  300
SNNIDEHIYE PAGGLSDWAA MDCVVASHLN NGQSETSKQF AAACFADSSS LGGFSTSSNE  360
NQELIHHYQS PPQQHQIRQL ATRPSSSMFQ TSHVIDYNSE IDLWNFAAGS NRYSSSSMTD  420
PLCSSHVSNP ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-101	NAC family protein