PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443210.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 935aa MW: 106574 Da PI: 7.7291

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.5	4.5e-23	75	160	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Yne A+++GFsvr++k k+ ng + kr fvC k+g r+++++ + r++r++ rtgC a++++k ek++kw+vt++ eHnH+l XP_026443210.1 75 TYNEVARRAGFSVRRDKLVKR-ANGMMRKRVFVCFKQGIRKKDNRY-QYVRKERPQIRTGCMARMVIKYEKENKWVVTDIICEHNHPL 160 69*************9997.9999*************999.999**********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence
MDTSGRSSNN RCSGSSPGNL EETVEQTIRG DTGQNLNGNQ GELDKSNDVE VDLNKLEDLI 60 YEGMVFESEE RAFDTYNEVA RRAGFSVRRD KLVKRANGMM RKRVFVCFKQ GIRKKDNRYQ 120 YVRKERPQIR TGCMARMVIK YEKENKWVVT DIICEHNHPL PTTSKSYRLR PQRRTAEAAI 180 NDLEGIDTVG ISPADGSKQI NGRQAEGHES VGNKLATLGN HIQSKRKILE KDDARTLLDY 240 FTRKKMENPA FFYSMIVDKE NQVTNLFWAD ARSIMDYNYF GDVVIFDTTY RTNLHGWPFA 300 PFVGVNHHKQ TVLFGGALIL DESTESFIWL FETWMKTMSG RQPKTIITDH CATISKAISI 360 VMTETHHRIC LWHIFKNASK HLSHVYWMPG FLQCFSKCIY GYETEEEFIA RWEKMLHDYK 420 LAGTKWLDDL FNVREKWALV YGHDTFCADT TTTQHNKNIN KFLKKFVKKK YSFTEFLARY 480 ERVLSAWRER ELHEDFESIQ TSPNLPFPAP MLKQAADKYT RAVFKMFVEE YKEWILCKVE 540 DCGEDGIFCK YEVTQENCVK GLVTIDPSTC QVLCSCKKFE FVGILCRHAI KILYHRNIHD 600 IPPQYILKRW SKDAKSGTVR DREGNQMQAD SSSLISLRYN ELLQKAINIA TKGSLNEESH 660 LVASRALDNA LLEVESATKA TQGGSSDDFH TSLATQSHSG ERVFVGEGGD KSIMFSARQI 720 IGDLDIGQKR RKTRNSFVDL SHELSMDNLH HQQGQNHRLP DGLKRNDPPI HPSLQIVSTP 780 NSAHLPYTPV SFSESTQFIY PIIRPNLQYI SSPYTQGSSG LGMEPCPFIT HGAPEGSYIS 840 SKPHNLGSTY SKPTTANTGF KPHQASFGEP RIPATFYPQP SSFPTRFESN QVINPHGSLQ 900 PSMYMDLHTT QGALGIESSE ESSDSDESQL SPLSN

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence

MDTSGRSSNN RCSGSSPGNL EETVEQTIRG DTGQNLNGNQ GELDKSNDVE VDLNKLEDLI  60
YEGMVFESEE RAFDTYNEVA RRAGFSVRRD KLVKRANGMM RKRVFVCFKQ GIRKKDNRYQ  120
YVRKERPQIR TGCMARMVIK YEKENKWVVT DIICEHNHPL PTTSKSYRLR PQRRTAEAAI  180
NDLEGIDTVG ISPADGSKQI NGRQAEGHES VGNKLATLGN HIQSKRKILE KDDARTLLDY  240
FTRKKMENPA FFYSMIVDKE NQVTNLFWAD ARSIMDYNYF GDVVIFDTTY RTNLHGWPFA  300
PFVGVNHHKQ TVLFGGALIL DESTESFIWL FETWMKTMSG RQPKTIITDH CATISKAISI  360
VMTETHHRIC LWHIFKNASK HLSHVYWMPG FLQCFSKCIY GYETEEEFIA RWEKMLHDYK  420
LAGTKWLDDL FNVREKWALV YGHDTFCADT TTTQHNKNIN KFLKKFVKKK YSFTEFLARY  480
ERVLSAWRER ELHEDFESIQ TSPNLPFPAP MLKQAADKYT RAVFKMFVEE YKEWILCKVE  540
DCGEDGIFCK YEVTQENCVK GLVTIDPSTC QVLCSCKKFE FVGILCRHAI KILYHRNIHD  600
IPPQYILKRW SKDAKSGTVR DREGNQMQAD SSSLISLRYN ELLQKAINIA TKGSLNEESH  660
LVASRALDNA LLEVESATKA TQGGSSDDFH TSLATQSHSG ERVFVGEGGD KSIMFSARQI  720
IGDLDIGQKR RKTRNSFVDL SHELSMDNLH HQQGQNHRLP DGLKRNDPPI HPSLQIVSTP  780
NSAHLPYTPV SFSESTQFIY PIIRPNLQYI SSPYTQGSSG LGMEPCPFIT HGAPEGSYIS  840
SKPHNLGSTY SKPTTANTGF KPHQASFGEP RIPATFYPQP SSFPTRFESN QVINPHGSLQ  900
PSMYMDLHTT QGALGIESSE ESSDSDESQL SPLSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein