PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 194aa MW: 22468.6 Da PI: 9.5599 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.5 | 1e-29 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k ien++nrqvt++kRr gi+KKA+ELS LCda+v+v++fs++gkl+ey XP_026443070.1 9 KYIENTTNRQVTYCKRRSGIMKKAHELSYLCDAQVCVVMFSERGKLHEYV 58 57***********************************************7 PP | |||||||
2 | K-box | 20 | 2.8e-08 | 93 | 149 | 15 | 70 |
K-box 15 eslqqelakLkkeienLqreqRhllG.edLesLslkeLqqLeqqLekslkkiRskKn 70 ++l++el+k k+ +++L++e+ ++ G edL++ s+ +L L+ +L +sl+ +R +K XP_026443070.1 93 KTLENELRKQKEINSTLRKEIGQRTGqEDLSEFSYGQLLVLKGDLRHSLEIVRHHKI 149 6789**********************779************************9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MVSGKRVMKY IENTTNRQVT YCKRRSGIMK KAHELSYLCD AQVCVVMFSE RGKLHEYVSP 60 STTMKELFDR YEKNTDIDLS PSEYEAGNVN LLKTLENELR KQKEINSTLR KEIGQRTGQE 120 DLSEFSYGQL LVLKGDLRHS LEIVRHHKIR SEEAHRGLRV RFLQGSHLNP LNAVPSQVTF 180 QLQPSQHNLH DAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 2e-37 | MIKC_MADS family protein |