PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026442610.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 489aa MW: 55189.8 Da PI: 6.3311

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026442610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.7e-10	288	335	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026442610.1 288 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 335 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MNRVLTQEML HCMQASSTSE NHNNNYRFSN GTDLTVLERQ RARQKWQQQQ HQQQETEAPQ 60 TYLSNDAHFD NLFQLPLTTS NFDHHQGFMN DSVMREFVNR SMKTDPSLEN GWSADFGKYP 120 VPKTGFGEEI ITTGFSSTSN GFVSNNINSG NEMSNISISR TTSCPPMVGD TVLPATIVAA 180 AAEEKSKEIC SPGKMSSIVG RKRKADKAHN SKVNGVAEEL RDKRIKVDMA EEVESKITHE 240 QPQQHKNNNI NNKENSSDTS KDNNSKISEV QKPDYIHVRA RRGQATDSHS LAERVRREKI 300 SERMKYLQDL VPGCNKITGK AGMLDEIINY VQSLQRQVEF LSMKLATVNP RLDVNIDNFF 360 AKDMFPSSGV FPNMGMLNAD MVNSSTYLQS FNPTMQEMIS SRGLDMVINP PEMAADLRRT 420 ISAPPLPLPD EFLDTSCFTQ DQPTSTTWET DLQNIYSMVE FPHGRARLSV FPHQSYTGSM 480 EGNNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MNRVLTQEML HCMQASSTSE NHNNNYRFSN GTDLTVLERQ RARQKWQQQQ HQQQETEAPQ  60
TYLSNDAHFD NLFQLPLTTS NFDHHQGFMN DSVMREFVNR SMKTDPSLEN GWSADFGKYP  120
VPKTGFGEEI ITTGFSSTSN GFVSNNINSG NEMSNISISR TTSCPPMVGD TVLPATIVAA  180
AAEEKSKEIC SPGKMSSIVG RKRKADKAHN SKVNGVAEEL RDKRIKVDMA EEVESKITHE  240
QPQQHKNNNI NNKENSSDTS KDNNSKISEV QKPDYIHVRA RRGQATDSHS LAERVRREKI  300
SERMKYLQDL VPGCNKITGK AGMLDEIINY VQSLQRQVEF LSMKLATVNP RLDVNIDNFF  360
AKDMFPSSGV FPNMGMLNAD MVNSSTYLQS FNPTMQEMIS SRGLDMVINP PEMAADLRRT  420
ISAPPLPLPD EFLDTSCFTQ DQPTSTTWET DLQNIYSMVE FPHGRARLSV FPHQSYTGSM  480
EGNNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	3e-53	bHLH family protein