PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026441916.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 159aa    MW: 17885.4 Da    PI: 6.7877
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026441916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.95.9e-1656146199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v++  +l lp  f++++  + +++ t+tl de g+++  ++   k++    l++GW  F+ a++L +gD +vF+l++ ++f  +++
  XP_026441916.1  56 FVKPMLHSHVNRGFWLGLPAYFCRKYL-P-KRDETITLVDEVGEEFPTNYLALKNG----LSGGWMWFALAHDLIDGDALVFQLVEPTKF--KIR 142
                     89************************5.3.35669***************777777....9**********************9876666..888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_026441916.1 143 IIRA 146
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
VFVYEYARRR SVNGFSKPRA IPLGDFPIAS EIDRESATTK AVNVEKDIGG DGFPCFVKPM  60
LHSHVNRGFW LGLPAYFCRK YLPKRDETIT LVDEVGEEFP TNYLALKNGL SGGWMWFALA  120
HDLIDGDALV FQLVEPTKFK IRIIRANGSQ DERNGEASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.16e-41B3 family protein