PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026441295.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 360aa    MW: 40978.8 Da    PI: 4.6302
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026441295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11193236654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_026441295.1 193 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 236
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEVDEQGFLE ELLSLRRESW ETFPPQMNAT TDDEMMMLSN GWSTFNCFNE MMITNNPPSL  60
HCFPPSPSLF GEMSSTKSQL DLVSSFNEMS VPFGEDLSFI MPEIGNFTFE QKQDAVPTPL  120
FIEQHDDQMV LPSPLLCNDH QPQKLIEDEN NDTNLKLEQV HQASTNQIQV FETGLERKTT  180
KVKKVEGQPS KNLMAERRRR KRLNDRLSML RSVVPKISKM DRTSILGDTI DYMKELLDRI  240
KTLRGEIAQM GGSTNNSMDI FKDIKSKEIL IRNTPKFEVD RREMDTRVEI SCAGKPGLLL  300
STITAIEALG LEMQQCVISC FSDFAMQASC AEELEQRKII SSDEIKQALF ISAGYGGRFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1196203ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-79bHLH family protein