PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026441005.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 573aa MW: 64354.8 Da PI: 5.1468

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026441005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	3e-13	313	364	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + a+i A++++k+L+ XP_026441005.1 313 QRMTHIAVERNRRRQMNDHLNALRSLMPSS---FVQRGDQASIIGGAIDFVKELE 364 79*************************9...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MEKFQGPTSN HHCFGGNLDQ GVLQQCHGNT SFNFSYGAPY FNLEEESFTI QEEQQQQEEP 60 NTNQQSSLSL SVPITSLEDK MPFLEMLKSV DSPYYSDPSP APLNPHFKML LTLQQQHQHQ 120 QIPHFSGSSS SDQSSMDYYY SHQLEASQPV AFQPQSCVTA TKVENQAHSS IKSEDNKENG 180 EQEHMEQLEQ DHAQDYYLSL HLESANNENN KTDNGELGGE PPNHSSPESL NCRQTVSSPT 240 TTCCLAETES CISPHDMPPS KTKSASKQAL PAARLVTSST TATTSGGGGG HEREKKKRKR 300 TRPNKNREEV ESQRMTHIAV ERNRRRQMND HLNALRSLMP SSFVQRGDQA SIIGGAIDFV 360 KELEQLLHSL EAKKRTRTSS EDEDDNEKVG VEEYKGRRRN RTCGNHSSLA PFLGFFSAPQ 420 YTSYSSSLFL KNDAEEEDEK EEEEVINEDE LRIMSSNNIK RSSNEHEYYS LSLLSPSSWL 480 GVDIEVVVVQ THVNLKILGP RKSGQLVRVI AALEQDLRLT ILHLNITSFE QSVLYSFNLK 540 IEDDCKLGGS ADEIATAVYQ IFSSTNNQLH LIS

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MEKFQGPTSN HHCFGGNLDQ GVLQQCHGNT SFNFSYGAPY FNLEEESFTI QEEQQQQEEP  60
NTNQQSSLSL SVPITSLEDK MPFLEMLKSV DSPYYSDPSP APLNPHFKML LTLQQQHQHQ  120
QIPHFSGSSS SDQSSMDYYY SHQLEASQPV AFQPQSCVTA TKVENQAHSS IKSEDNKENG  180
EQEHMEQLEQ DHAQDYYLSL HLESANNENN KTDNGELGGE PPNHSSPESL NCRQTVSSPT  240
TTCCLAETES CISPHDMPPS KTKSASKQAL PAARLVTSST TATTSGGGGG HEREKKKRKR  300
TRPNKNREEV ESQRMTHIAV ERNRRRQMND HLNALRSLMP SSFVQRGDQA SIIGGAIDFV  360
KELEQLLHSL EAKKRTRTSS EDEDDNEKVG VEEYKGRRRN RTCGNHSSLA PFLGFFSAPQ  420
YTSYSSSLFL KNDAEEEDEK EEEEVINEDE LRIMSSNNIK RSSNEHEYYS LSLLSPSSWL  480
GVDIEVVVVQ THVNLKILGP RKSGQLVRVI AALEQDLRLT ILHLNITSFE QSVLYSFNLK  540
IEDDCKLGGS ADEIATAVYQ IFSSTNNQLH LIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	KKRKRT
2	314	325	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	4e-42	bHLH family protein