PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440372.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 517aa MW: 56067.1 Da PI: 4.6221

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	312	357	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P+a + +K+++L + +eY+k Lq XP_026440372.1 312 HSIAERLRREKIADRMKNLQELVPNA-----SRADKSSMLDEIIEYVKFLQ 357 99*********************9.....79***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MDEFLDQIFS SSSRPDVSTV ERSSWGRNGL AQNDGLLTDC LGMFEGGERN LPVNMPPSSQ 60 CMDKLATSYD FSKDLLTDEP QFLGEVFNRD IQSLYGAELV NAGNMNSSYM SMQSNMYLST 120 LDSLSRSSPE LVPVVSGSDQ SPCALRESGS VGSNDSEASG IHLSIGESNS FTSIPQLWTT 180 PSYGGVPSLP PVIEQDKLQG FGLQGDFVET DANGFGIGDD KNLNVRNFNS LTSAQEELNG 240 LPFFVPNNQI PVARTHSQMQ LPQLSEGNPT AHYTDQNPVS QLPHSSVTPG GGCNGDTKSR 300 TRARRGHATD PHSIAERLRR EKIADRMKNL QELVPNASRA DKSSMLDEII EYVKFLQLQV 360 KVLSMSRLGA AGAVVPLITD GQPEGSGNLL LTGQEGDQSD SEDNAAFEEE LVKLMESNVT 420 AAMQFLQTKG LCLMPIALAG ALSSKKEASS PDSSDKKKPY FTNGHLPHNN NPPSANSNGH 480 NFSPNGNTMQ RQNTVNNCFN KDVKQENTAN ARVYRID

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MDEFLDQIFS SSSRPDVSTV ERSSWGRNGL AQNDGLLTDC LGMFEGGERN LPVNMPPSSQ  60
CMDKLATSYD FSKDLLTDEP QFLGEVFNRD IQSLYGAELV NAGNMNSSYM SMQSNMYLST  120
LDSLSRSSPE LVPVVSGSDQ SPCALRESGS VGSNDSEASG IHLSIGESNS FTSIPQLWTT  180
PSYGGVPSLP PVIEQDKLQG FGLQGDFVET DANGFGIGDD KNLNVRNFNS LTSAQEELNG  240
LPFFVPNNQI PVARTHSQMQ LPQLSEGNPT AHYTDQNPVS QLPHSSVTPG GGCNGDTKSR  300
TRARRGHATD PHSIAERLRR EKIADRMKNL QELVPNASRA DKSSMLDEII EYVKFLQLQV  360
KVLSMSRLGA AGAVVPLITD GQPEGSGNLL LTGQEGDQSD SEDNAAFEEE LVKLMESNVT  420
AAMQFLQTKG LCLMPIALAG ALSSKKEASS PDSSDKKKPY FTNGHLPHNN NPPSANSNGH  480
NFSPNGNTMQ RQNTVNNCFN KDVKQENTAN ARVYRID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	1e-51	bHLH family protein