PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440163.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 220aa    MW: 24249 Da    PI: 7.0518
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.11.5e-4361051100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+Ca+dC++apyfp+++p+kfa++hk+FGasn++k++++lp ++r da+sslv+eA+ar+rdPvyG+vg i+ lq+q++ql+ +la
  XP_026440163.1   6 PCASCKLLRRRCAADCIFAPYFPSDDPNKFAIAHKVFGASNISKMIQELPMQQRADAVSSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_026440163.1 101 VAQAE 105
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGGTSPCASC KLLRRRCAAD CIFAPYFPSD DPNKFAIAHK VFGASNISKM IQELPMQQRA  60
DAVSSLVFEA NARVRDPVYG CVGAISYLQN QVSQLQMQLA VAQAEILYFK MQQAAAEADL  120
LPTSTTTTNS TTNTNSTASP NNNSTATTTT TTNHHHQQLN QIIDLVDNHH HHDEKSSSVN  180
LFQSSNNSLL HNLPQYLTTF QSSNNIAIHQ DPLKRESLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.13e-69LBD family protein