PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439955.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 800aa MW: 88566.8 Da PI: 7.5262

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	60	102	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+ + +a +q G++ +++I ++++ + q++++++ + XP_026439955.1 60 AWTHEEERSFFNALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 102 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MDMELEEGVE FEGFFQSQSL LIKEAEAAAA AATSPTSCIV DPQKRVRSKA VKRPTRQWAA 60 WTHEEERSFF NALRQVGKNF EKITSRVQSK NKDQVRHYYY RLVRRMNKLL GPDFILDARN 120 FKETNGAMLR WSALLEKYNC KASKLHLKPR RFKIIVEALE QQLLKDRKKY VKKRRSKGEK 180 CSTTTPDTVS LPNKAPAADT GAVTVVAVDS QNVPKGSSGR GSSVKRNVNT GINRKNNKCD 240 LATVKTAKQR KKTGSSSSAA YKKWEKAAMA GVSLVADAAE HLERTTISKE TSTDRRSSDE 300 SLPSIAVTAA EKGNDPFGVL PLLPLSAGLL TQVPDTCMPP NCGKLKLQLF PIDEDTRKAL 360 EKDEHNPFLE LTLSARKKIS SVLEHLNRKW GKSSIASGEL SLFQYDAQRG NLVGHQRWKQ 420 DTVASAADVY TVIGSPPLFR LRYGWFSPAD LTLVTSGMKE QTISSTTMPP LHDCHTCIHL 480 MKPSEGQQTQ IMEKNDVVPS YVDLTDDTVR YNGMDRENII EDIAHLKSWP GKESGREIIR 540 GPCNDGDNPR RSNNNTTSAG DWADSLTHIS IGELLVDQSQ AMGINDFQSA AMDSSAFLHQ 600 IPFSCDSFDA AIAAHIYGNR DKQDPLSTEV PHASSIWDAE ETCDAFSFQK IPRTPIPASF 660 GTSRQTTDTS TMVNRSTELR EVDHTGDNPI CEVDLTNNNP SDAYKVDEHP KDLGGLTDLY 720 WPDSLGPLDL DIPSSRYQDQ DLMLGDGVSL TGLNRLIASS LDAFQNCSFF GLDKKDQPPP 780 TTEARGTAAP FLDCKIGGKV

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MDMELEEGVE FEGFFQSQSL LIKEAEAAAA AATSPTSCIV DPQKRVRSKA VKRPTRQWAA  60
WTHEEERSFF NALRQVGKNF EKITSRVQSK NKDQVRHYYY RLVRRMNKLL GPDFILDARN  120
FKETNGAMLR WSALLEKYNC KASKLHLKPR RFKIIVEALE QQLLKDRKKY VKKRRSKGEK  180
CSTTTPDTVS LPNKAPAADT GAVTVVAVDS QNVPKGSSGR GSSVKRNVNT GINRKNNKCD  240
LATVKTAKQR KKTGSSSSAA YKKWEKAAMA GVSLVADAAE HLERTTISKE TSTDRRSSDE  300
SLPSIAVTAA EKGNDPFGVL PLLPLSAGLL TQVPDTCMPP NCGKLKLQLF PIDEDTRKAL  360
EKDEHNPFLE LTLSARKKIS SVLEHLNRKW GKSSIASGEL SLFQYDAQRG NLVGHQRWKQ  420
DTVASAADVY TVIGSPPLFR LRYGWFSPAD LTLVTSGMKE QTISSTTMPP LHDCHTCIHL  480
MKPSEGQQTQ IMEKNDVVPS YVDLTDDTVR YNGMDRENII EDIAHLKSWP GKESGREIIR  540
GPCNDGDNPR RSNNNTTSAG DWADSLTHIS IGELLVDQSQ AMGINDFQSA AMDSSAFLHQ  600
IPFSCDSFDA AIAAHIYGNR DKQDPLSTEV PHASSIWDAE ETCDAFSFQK IPRTPIPASF  660
GTSRQTTDTS TMVNRSTELR EVDHTGDNPI CEVDLTNNNP SDAYKVDEHP KDLGGLTDLY  720
WPDSLGPLDL DIPSSRYQDQ DLMLGDGVSL TGLNRLIASS LDAFQNCSFF GLDKKDQPPP  780
TTEARGTAAP FLDCKIGGKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	177	KKRRSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein